Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011966.1-P | Field mustard | nucleus | 97.9 | 88.61 |
| CDX71367 | Canola | nucleus | 82.39 | 83.44 |
| AT2G28240.1 | Thale cress | nucleus | 49.27 | 35.61 |
Protein Annotations
| EnsemblPlants:CDY04547 | EnsemblPlantsGene:GSBRNA2T00118726001 | ncoils:Coil | PANTHER:PTHR35116 | PANTHER:PTHR35116:SF2 | ProteinID:CDY04547 |
| ProteinID:CDY04547.1 | SEG:seg | UniParc:UPI0004EE4320 | MapMan:35.2 | : | : |
Description
BnaA07g13730D
Coordinates
chrLK031955:+:637340..640187
Molecular Weight (calculated)
51549.1 Da
IEP (calculated)
6.467
GRAVY (calculated)
-0.652
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTAENEAT TVHITSPQIL TASAEDQLCD VEMLPVPEGY MTTTTTSHDA DTVLDQEFVV PFPDPASTLD IHGSARSHQG VQGTCSMPSS SEQMAFRAAS
101: SVNHSEAVHE NGVQPPNISH FGSTPLANNP TMGQNPPRHL FSDPYEYELE KIRIEEENLK KSVDETTSQL MAELERKMAE ARSEFDKESQ EFDAKVMEVE
201: TRMGLVRTGS LLGNAFVSKC SERSASNDLA AVRAAMISQH STQQQQAVQT NTQMSSTAPP RVRPHQESTR LSTSAPPRPS VIAVDDDPVP NSSAPLPHLP
301: RRPMTQPSPM SQQTAQAAHT HVNSTAPLPP PVTAVGPQAP NHLRPLARFP QAVAQSNTNV NSSTPLPRPS AITEGLPLHS PLSNTPRPRP RPVISNMTPP
401: SSSSPPVRGP APHIVRASAP HLARRRAPHL RQYGSFPAPT FAAAAATTQP RRSVQEQEQQ QQQEKSHGGL VNLSDED
101: SVNHSEAVHE NGVQPPNISH FGSTPLANNP TMGQNPPRHL FSDPYEYELE KIRIEEENLK KSVDETTSQL MAELERKMAE ARSEFDKESQ EFDAKVMEVE
201: TRMGLVRTGS LLGNAFVSKC SERSASNDLA AVRAAMISQH STQQQQAVQT NTQMSSTAPP RVRPHQESTR LSTSAPPRPS VIAVDDDPVP NSSAPLPHLP
301: RRPMTQPSPM SQQTAQAAHT HVNSTAPLPP PVTAVGPQAP NHLRPLARFP QAVAQSNTNV NSSTPLPRPS AITEGLPLHS PLSNTPRPRP RPVISNMTPP
401: SSSSPPVRGP APHIVRASAP HLARRRAPHL RQYGSFPAPT FAAAAATTQP RRSVQEQEQQ QQQEKSHGGL VNLSDED
001: MVPMETQEVT DSLPKAQSKS GSTQLDGPGM VSSANIPEVL TEDMVCDTVM PPVSVSGAAS LELPLNVEEA PLIREESNRT SHDADAILVQ EFSSRFPDHA
101: SILDIQGSAR SDQRAQGTGC PPSSSVPVQN ITTAAEHWTS TSTPLVNHSE DVVEGGVQPP NVLHSRLTVN ASAVTSLPNN HMGQSPRLHL SSFSDICDHE
201: LEKLSREQGT LLKSFEETTL ELKAELERKM AEARSEYDRK SQEVDAAYNA QAKKNEALRS LVVMNSLLAN AYKSTCPVKS AATDTATVRA PRSSQHSTQQ
301: QQAVQTNRHM NSTAPPRPSV TAAEPMNSAA PPRPSVTAAE PMNSTAPPRP SVTAAEATPP NLSAPLPHCN TPQPSPISQQ AAVESNTQMQ STALPRPSVT
401: AEARPLHQPH SNTSQPRPIP QQALAQSNTN ITSTALPRPS ITAEARLLHQ PHSNTPQPRP IPQKALVQAN TDINSTALPR PLVTAEAPPL HQSSCKAPQP
501: KPISQQPAVQ SKTDIINSTA LPRPSVTTEA RPLHQPRSKT PQPKPVSQPP AKQSNTEINS TPHPRPSVTS KAISLQSPPC NTPQPRPPPL ISNHTPTSYQ
601: PASAPPVHGI ARRTMAPHLR SSRAPNSAAA PSTYPRLAQE QQKQQQKKSN SSLVYLSDDD
101: SILDIQGSAR SDQRAQGTGC PPSSSVPVQN ITTAAEHWTS TSTPLVNHSE DVVEGGVQPP NVLHSRLTVN ASAVTSLPNN HMGQSPRLHL SSFSDICDHE
201: LEKLSREQGT LLKSFEETTL ELKAELERKM AEARSEYDRK SQEVDAAYNA QAKKNEALRS LVVMNSLLAN AYKSTCPVKS AATDTATVRA PRSSQHSTQQ
301: QQAVQTNRHM NSTAPPRPSV TAAEPMNSAA PPRPSVTAAE PMNSTAPPRP SVTAAEATPP NLSAPLPHCN TPQPSPISQQ AAVESNTQMQ STALPRPSVT
401: AEARPLHQPH SNTSQPRPIP QQALAQSNTN ITSTALPRPS ITAEARLLHQ PHSNTPQPRP IPQKALVQAN TDINSTALPR PLVTAEAPPL HQSSCKAPQP
501: KPISQQPAVQ SKTDIINSTA LPRPSVTTEA RPLHQPRSKT PQPKPVSQPP AKQSNTEINS TPHPRPSVTS KAISLQSPPC NTPQPRPPPL ISNHTPTSYQ
601: PASAPPVHGI ARRTMAPHLR SSRAPNSAAA PSTYPRLAQE QQKQQQKKSN SSLVYLSDDD
Arabidopsis Description
ATP-dependent helicase family protein [Source:UniProtKB/TrEMBL;Acc:Q84JK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.