Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Protein Annotations
| EnsemblPlants:CDY23969 | EnsemblPlantsGene:GSBRNA2T00024481001 | GO:A0A078GF48 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34118 | PANTHER:PTHR34118:SF3 | ProteinID:CDY23969 | ProteinID:CDY23969.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE19D8 | UniProt:A0A078GF48 | MapMan:1.1.9.3.1 | : | : | : |
Description
BnaC03g17220DBnaC03g17220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF48]
Coordinates
chrLK032152:+:226664..228958
Molecular Weight (calculated)
26178.3 Da
IEP (calculated)
10.011
GRAVY (calculated)
0.248
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMFGNTVDA MADGARGVMK GAAGQRRLLV LVVLVMIFIR WNTILVPQYE FIALGADTNV DQTRSNVGLS VIFVKSSFVN IIELLTSHLN LFNIFLGASI
101: IGNNNGRRFV FSRQFNQINY MLREQTCIPK KKNSCLELSQ AAGQPRLLVP VVLVMIFNRW NALLVPEYWI HALEVETNVG WVLYLQYCYI LSSYRRSHLR
201: FYSKNRCLKA PVSVYINKLD CCVLRGQSD
101: IGNNNGRRFV FSRQFNQINY MLREQTCIPK KKNSCLELSQ AAGQPRLLVP VVLVMIFNRW NALLVPEYWI HALEVETNVG WVLYLQYCYI LSSYRRSHLR
201: FYSKNRCLKA PVSVYINKLD CCVLRGQSD
001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD
Arabidopsis Description
CGL160Protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82279]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.