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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31462 Canola nucleus 57.98 34.5
CDX78968 Canola nucleus 55.46 32.04
AT4G20000.1 Thale cress nucleus 55.46 31.73
Protein Annotations
EnsemblPlants:CDY26409EnsemblPlantsGene:GSBRNA2T00035194001InterPro:VQPANTHER:PTHR33179PANTHER:PTHR33179:SF1PFAM:PF05678
ProteinID:CDY26409ProteinID:CDY26409.1UniParc:UPI0004EDCAB2UniProt:A0A078GMG0MapMan:35.2:
Description
BnaA02g23610DBnaA02g23610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMG0]
Coordinates
chrLK032189:+:576905..577363
Molecular Weight (calculated)
13372.5 Da
IEP (calculated)
4.889
GRAVY (calculated)
-0.521
Length
119 amino acids
Sequence
(BLAST)
001: MPTTLLKANP SNFRALVQKY TGRSTGIDVS SGRKGPVTLD FRSPASVLKE VIFPSSGDLQ NHDCATYRHS GYGESHVTCE REGDLVREYL ENSSFNGVNC
101: DDFYHDTVLL EEFMRDLDF
Best Arabidopsis Sequence Match ( AT4G20000.1 )
(BLAST)
001: MNNSREDQWL QHYEQQNIQE ITPCFNAINI ASSSGSSLGD GGAAAHEAAG RRSRASRRAI PTTLLNANPS NFRALVQKFT GRSAGGESNR RKGPVTLDFG
101: SPTTISKEAI FPVSSDRSNN NLDHVVNQHV SNEQRHVTWS GTESMMSYQL GEETNSAVYS SGYDDQDLPR EYSGNSSYDE SLDHMDYYQD FHRETATLEE
201: FMMRDLDL
Arabidopsis Description
At4g20000 [Source:UniProtKB/TrEMBL;Acc:O49427]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.