CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:

nucleus 2
plastid 1
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022105.1-P	Field mustard	peroxisome	95.94	95.94
CDY40577	Canola	peroxisome	94.16	94.16
CDY36555	Canola	peroxisome	91.88	93.06
AT3G01910.1	Thale cress	peroxisome	89.09	89.31
CDY39641	Canola	cytosol	90.61	89.25
KRG94262	Soybean	cytoskeleton, cytosol, peroxisome	76.9	77.1
PGSC0003DMT400052064	Potato	cytosol, mitochondrion, peroxisome	75.89	76.08
VIT_14s0068g02110.t01	Wine grape	mitochondrion	75.13	75.32
Solyc02g094120.2.1	Tomato	cytoskeleton, mitochondrion, peroxisome	75.13	75.32
Os08t0530400-01	Rice	plasma membrane	73.86	73.3
EES15314	Sorghum	cytoskeleton, mitochondrion, peroxisome	70.3	70.13
Os12t0442800-01	Rice	mitochondrion	69.54	68.5
KRH57695	Soybean	peroxisome	55.08	68.24
GSMUA_Achr8P34330_001	Banana	cytosol, mitochondrion, peroxisome	68.53	68.18
TraesCS7B01G157800.1	Wheat	peroxisome	68.02	67.51
HORVU7Hr1G054060.3	Barley	peroxisome	67.26	66.75
EES19022	Sorghum	cytosol	67.26	66.58
Zm00001d031617_P001	Maize	extracellular, mitochondrion, plasma membrane	70.81	65.34
TraesCS7A01G259700.1	Wheat	peroxisome	67.77	64.81
TraesCS7D01G260700.1	Wheat	peroxisome	67.77	64.81
Zm00001d040496_P001	Maize	mitochondrion	18.27	60.0

Protein Annotations

Gene3D:2.60.40.650	MapMan:25.2.2.1	Gene3D:3.90.420.10	GO:A0A078GR11	UniProt:A0A078GR11	EnsemblPlants:CDY28975
ProteinID:CDY28975	ProteinID:CDY28975.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0030151	GO:GO:0042128	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00041690001	InterPro:IPR036374	InterPro:Ig_E-set	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:OxRdtase_Mopterin-bd_dom
InterPro:OxRdtase_Mopterin-bd_sf	PFAM:PF00174	PFAM:PF03404	PRINTS:PR00407	PANTHER:PTHR19372	PANTHER:PTHR19372:SF10
SUPFAM:SSF56524	SUPFAM:SSF81296	UniParc:UPI0004EE57A3	:	:	:

Description

BnaA02g25010DBnaA02g25010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR11]

Coordinates

chrLK032228:-:455251..458209

Molecular Weight (calculated)

43475.0 Da

IEP (calculated)

8.672

GRAVY (calculated)

-0.254

Length

394 amino acids

Sequence
(BLAST)

001: MPGIRGPSDY SQEPSRKPLI SSLLCFPFNA EPPRSALVQS YVTPVPLFYK RNHGPIPIID HIHNYSVSFT GLIDNPTKLF IKDIKSLPKF NVTATLQCAG
101: NRRTAMSKVR NVRGVGWDVS AIGNAVWGGA KLADVLELLG VPKLTGSTRL GGRHVEFVSV DRCKEENGGP YKASIPLNQA TNPEADVLLA YEMNGEILNR
201: DHGYPLRLVV PGVIGARSVK WLDSINVIAE ECQGFFMQKD YKMFPPSVNW DNIDWSTRRP QMDFPVQSAI CSLEDVQMVK PGKVSIKGYA VSGGGRGIER
301: VDISMDGGKS WVEASRTQKP GKDYISEHSS SDKWAWVLFE ATIDVSQSTT EVIAKAVDSA ANVQPENVES VWNLRGVLNT SWHRVLLRLG HSNL

Best Arabidopsis Sequence Match ( AT3G01910.1 )
(BLAST)

001: MPGIRGPSEY SQEPPRHPSL KVNAKEPFNA EPPRSALVSS YVTPVDLFYK RNHGPIPIVD HLQSYSVTLT GLIQNPRKLF IKDIRSLPKY NVTATLQCAG
101: NRRTAMSKVR NVRGVGWDVS AIGNAVWGGA KLADVLELVG IPKLTASTNL GARHVEFVSV DRCKEENGGP YKASITLSQA TNPEADVLLA YEMNGETLNR
201: DHGFPLRVVV PGVIGARSVK WLDSINVIAE ESQGFFMQKD YKMFPPSVNW DNINWSSRRP QMDFPVQSAI CSVEDVQMVK PGKVSIKGYA VSGGGRGIER
301: VDISLDGGKN WVEASRTQEP GKQYISEHSS SDKWAWVLFE ATIDVSQTTE VIAKAVDSAA NVQPENVESV WNLRGVLNTS WHRVLLRLGH SNL

Arabidopsis Description

SOXSulfite oxidase [Source:UniProtKB/TrEMBL;Acc:Q0WWA1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.