CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
peroxisome 5
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57695	Soybean	peroxisome	64.12	79.25
CDY36555	Canola	peroxisome	77.35	78.15
Bra022105.1-P	Field mustard	peroxisome	78.12	77.92
Solyc02g094120.2.1	Tomato	cytoskeleton, mitochondrion, peroxisome	77.86	77.86
CDY40577	Canola	peroxisome	77.86	77.67
PGSC0003DMT400052064	Potato	cytosol, mitochondrion, peroxisome	77.61	77.61
AT3G01910.1	Thale cress	peroxisome	77.61	77.61
Bra026136.1-P	Field mustard	peroxisome	76.59	77.38
VIT_14s0068g02110.t01	Wine grape	mitochondrion	77.35	77.35
CDY28975	Canola	mitochondrion, nucleus, peroxisome	77.1	76.9
CDY39641	Canola	cytosol	78.12	76.75
EES15314	Sorghum	cytoskeleton, mitochondrion, peroxisome	76.84	76.46
Os08t0530400-01	Rice	plasma membrane	77.1	76.32
GSMUA_Achr8P34330_001	Banana	cytosol, mitochondrion, peroxisome	74.55	73.99
TraesCS7B01G157800.1	Wheat	peroxisome	71.5	70.78
HORVU7Hr1G054060.3	Barley	peroxisome	71.25	70.53
Zm00001d031617_P001	Maize	extracellular, mitochondrion, plasma membrane	76.34	70.26
Os12t0442800-01	Rice	mitochondrion	70.99	69.75
TraesCS7D01G260700.1	Wheat	peroxisome	71.76	68.45
TraesCS7A01G259700.1	Wheat	peroxisome	71.5	68.2
EES19022	Sorghum	cytosol	67.94	67.09
Zm00001d040496_P001	Maize	mitochondrion	20.1	65.83

Protein Annotations

EntrezGene:100787558	Gene3D:2.60.40.650	MapMan:25.2.2.1	Gene3D:3.90.420.10	EMBL:ACUP02011913	EnsemblPlantsGene:GLYMA_19G071800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005777	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152
GO:GO:0008482	GO:GO:0009987	GO:GO:0010477	GO:GO:0015994	GO:GO:0016491	GO:GO:0030151
GO:GO:0042128	GO:GO:0055114	UniProt:I1N786	InterPro:IPR036374	InterPro:Ig_E-set	EnsemblPlants:KRG94262
ProteinID:KRG94262	ProteinID:KRG94262.1	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf
PFAM:PF00174	PFAM:PF03404	PRINTS:PR00407	PANTHER:PTHR19372	PANTHER:PTHR19372:SF10	SUPFAM:SSF56524
SUPFAM:SSF81296	UniParc:UPI000233F166	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:24662574..24674110

Molecular Weight (calculated)

43540.0 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.276

Length

393 amino acids

Sequence
(BLAST)

001: MPGLTAPSDY SQEPPRHSSL LINAKEPFNA EPPRAALVAS YVTPSDFFYK RNHGPIPIVE NINRYSVNVS GLVERPKQLF MKDIWMLPKY NVTATLQCAG
101: NRRTAMSKTK TVKGVGWDVS AIGNAIWGGA KLSDVLELIG IPKLTSVTEF GGRHVEFVSI DKCKEENGGP YKASIPLSQA TNPEADVLLA YEMNGEPLNR
201: DHGYPLRVVV PGVIGARSVK WLEDINIIEE ECQGFFMQKD YKMFPPSVNW DNIDWSTRRP QMDFPVQCVI CSLEDVSTIK PGKVKISGYA ASGGGRGIER
301: VDVSVDGGKT WMEASRIQKS GVPYISEHAS SDKWAWVLFE VTADILHSTE IIAKAVDSAA NVQPEKVEDI WNLRGILNTS WHRVKVQASY SNL

Best Arabidopsis Sequence Match ( AT3G01910.1 )
(BLAST)

001: MPGIRGPSEY SQEPPRHPSL KVNAKEPFNA EPPRSALVSS YVTPVDLFYK RNHGPIPIVD HLQSYSVTLT GLIQNPRKLF IKDIRSLPKY NVTATLQCAG
101: NRRTAMSKVR NVRGVGWDVS AIGNAVWGGA KLADVLELVG IPKLTASTNL GARHVEFVSV DRCKEENGGP YKASITLSQA TNPEADVLLA YEMNGETLNR
201: DHGFPLRVVV PGVIGARSVK WLDSINVIAE ESQGFFMQKD YKMFPPSVNW DNINWSSRRP QMDFPVQSAI CSVEDVQMVK PGKVSIKGYA VSGGGRGIER
301: VDISLDGGKN WVEASRTQEP GKQYISEHSS SDKWAWVLFE ATIDVSQTTE VIAKAVDSAA NVQPENVESV WNLRGVLNTS WHRVLLRLGH SNL

Arabidopsis Description

SOXSulfite oxidase [Source:UniProtKB/TrEMBL;Acc:Q0WWA1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.