CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36555	Canola	peroxisome	92.5	95.12
CDY40577	Canola	peroxisome	91.0	92.39
AT3G01910.1	Thale cress	peroxisome	90.0	91.6
CDY28975	Canola	mitochondrion, nucleus, peroxisome	89.25	90.61
PGSC0003DMT400052064	Potato	cytosol, mitochondrion, peroxisome	76.75	78.12
KRG94262	Soybean	cytoskeleton, cytosol, peroxisome	76.75	78.12
VIT_14s0068g02110.t01	Wine grape	mitochondrion	75.25	76.59
Solyc02g094120.2.1	Tomato	cytoskeleton, mitochondrion, peroxisome	75.25	76.59
Os08t0530400-01	Rice	plasma membrane	74.0	74.56
EES15314	Sorghum	cytoskeleton, mitochondrion, peroxisome	70.75	71.65
GSMUA_Achr8P34330_001	Banana	cytosol, mitochondrion, peroxisome	69.25	69.95
KRH57695	Soybean	peroxisome	54.75	68.87
TraesCS7B01G157800.1	Wheat	peroxisome	68.25	68.77
HORVU7Hr1G054060.3	Barley	peroxisome	67.5	68.01
Os12t0442800-01	Rice	mitochondrion	68.0	68.0
EES19022	Sorghum	cytosol	66.25	66.58
Zm00001d031617_P001	Maize	extracellular, mitochondrion, plasma membrane	70.5	66.04
TraesCS7A01G259700.1	Wheat	peroxisome	68.0	66.02
TraesCS7D01G260700.1	Wheat	peroxisome	68.0	66.02
Zm00001d040496_P001	Maize	mitochondrion	18.0	60.0

Protein Annotations

Gene3D:2.60.40.650	MapMan:25.2.2.1	Gene3D:3.90.420.10	GO:A0A078HPW6	UniProt:A0A078HPW6	EnsemblPlants:CDY39641
ProteinID:CDY39641	ProteinID:CDY39641.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0030151	GO:GO:0042128	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00068210001	InterPro:IPR036374	InterPro:Ig_E-set	InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:OxRdtase_Mopterin-bd_dom
InterPro:OxRdtase_Mopterin-bd_sf	PFAM:PF00174	PFAM:PF03404	PRINTS:PR00407	PANTHER:PTHR19372	PANTHER:PTHR19372:SF10
SUPFAM:SSF56524	SUPFAM:SSF81296	UniParc:UPI0004EE3187	SEG:seg	:	:

Description

BnaC05g11700DBnaC05g11700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPW6]

Coordinates

chrLK032453:-:217789..220075

Molecular Weight (calculated)

44262.8 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.263

Length

400 amino acids

Sequence
(BLAST)

001: MPGIRGPSEY SQEPPRDPCF KVNAKASSPF FFEPFNAEPP RSALVSSYVT PVHLFYKRNH GPIPIVDHIE NYSVAVTGLI DNPKMLFIKD IRSLPKYNVT
101: ATLQCAGNRR TAMSKVRNVR GVGWDVSAIG NAVWGGAKLA DVLELLGIPK LTGFTTLGGR HVEFVSVDRC KEENGGPYKA SIPLSQATNP DADVLLAYEM
201: NGEILNRDHG FPLRVVVPGV IGARSVKWLD SINLLAEECQ GFFMQKDYKM FPPSVNWDNI NWSSRRPQMD FPVQSAICSL EDVQMVRPGK VSIKGYAVSG
301: GGRGIERVDI SMDGGKSWVE ASRTQKPGRD YISEHNSSDK WAWVLFEATF DVSQSTEVIA KAVDSAANVQ PENVESVWNL RGVLNTSWHR VLLRLGHSNL

Best Arabidopsis Sequence Match ( AT3G01910.1 )
(BLAST)

001: MPGIRGPSEY SQEPPRHPSL KVNAKEPFNA EPPRSALVSS YVTPVDLFYK RNHGPIPIVD HLQSYSVTLT GLIQNPRKLF IKDIRSLPKY NVTATLQCAG
101: NRRTAMSKVR NVRGVGWDVS AIGNAVWGGA KLADVLELVG IPKLTASTNL GARHVEFVSV DRCKEENGGP YKASITLSQA TNPEADVLLA YEMNGETLNR
201: DHGFPLRVVV PGVIGARSVK WLDSINVIAE ESQGFFMQKD YKMFPPSVNW DNINWSSRRP QMDFPVQSAI CSVEDVQMVK PGKVSIKGYA VSGGGRGIER
301: VDISLDGGKN WVEASRTQEP GKQYISEHSS SDKWAWVLFE ATIDVSQTTE VIAKAVDSAA NVQPENVESV WNLRGVLNTS WHRVLLRLGH SNL

Arabidopsis Description

SOXSulfite oxidase [Source:UniProtKB/TrEMBL;Acc:Q0WWA1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.