Factsheet for VIT_14s0068g02110.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052064	Potato	cytosol, mitochondrion, peroxisome	80.15	80.15
Solyc02g094120.2.1	Tomato	cytoskeleton, mitochondrion, peroxisome	79.13	79.13
KRG94262	Soybean	cytoskeleton, cytosol, peroxisome	77.35	77.35
CDY36555	Canola	peroxisome	76.34	77.12
Bra026136.1-P	Field mustard	peroxisome	75.57	76.35
Bra022105.1-P	Field mustard	peroxisome	76.34	76.14
CDY40577	Canola	peroxisome	75.57	75.38
AT3G01910.1	Thale cress	peroxisome	75.32	75.32
CDY39641	Canola	cytosol	76.59	75.25
CDY28975	Canola	mitochondrion, nucleus, peroxisome	75.32	75.13
Os08t0530400-01	Rice	plasma membrane	75.06	74.31
GSMUA_Achr8P34330_001	Banana	cytosol, mitochondrion, peroxisome	74.81	74.24
EES15314	Sorghum	cytoskeleton, mitochondrion, peroxisome	73.28	72.91
TraesCS7B01G157800.1	Wheat	peroxisome	69.47	68.77
HORVU7Hr1G054060.3	Barley	peroxisome	69.21	68.51
KRH57695	Soybean	peroxisome	55.22	68.24
Os12t0442800-01	Rice	mitochondrion	69.21	68.0
EES19022	Sorghum	cytosol	68.19	67.34
Zm00001d031617_P001	Maize	extracellular, mitochondrion, plasma membrane	72.77	66.98
TraesCS7A01G259700.1	Wheat	peroxisome	69.47	66.26
TraesCS7D01G260700.1	Wheat	peroxisome	69.47	66.26
Zm00001d040496_P001	Maize	mitochondrion	18.83	61.67

Protein Annotations

EntrezGene:100263528	wikigene:100263528	Gene3D:2.60.40.650	MapMan:25.2.2.1	Gene3D:3.90.420.10	UniProt:A5BE40
EMBL:AM456220	ProteinID:CAN70050	ProteinID:CAN70050.1	ProteinID:CBI21356	ProteinID:CBI21356.3	EMBL:FN595232
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005777	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152
GO:GO:0008482	GO:GO:0009987	GO:GO:0010477	GO:GO:0015994	GO:GO:0016491	GO:GO:0030151
GO:GO:0042128	GO:GO:0055114	InterPro:IPR036374	InterPro:Ig_E-set	EntrezGene:LOC100263528	wikigene:LOC100263528
InterPro:MoCF_OxRdtse_dimer	InterPro:Mopterin_OxRdtase_euk	InterPro:OxRdtase_Mopterin-bd_dom	InterPro:OxRdtase_Mopterin-bd_sf	PFAM:PF00174	PFAM:PF03404
PRINTS:PR00407	PANTHER:PTHR19372	PANTHER:PTHR19372:SF10	SUPFAM:SSF56524	SUPFAM:SSF81296	TIGR:TC59947
UniParc:UPI000152099B	ArrayExpress:VIT_14s0068g02110	EnsemblPlantsGene:VIT_14s0068g02110	EnsemblPlants:VIT_14s0068g02110.t01	unigene:Vvi.319	RefSeq:XP_002269273
RefSeq:XP_002269273.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:+:25707772..25712673

Molecular Weight (calculated)

43434.0 Da

IEP (calculated)

6.938

GRAVY (calculated)

-0.269

Length

393 amino acids

Sequence
(BLAST)

001: MPGLRGPSDY SREPARHPCL RINAKAPFNA EPPRSMLITT YVTPVDLFYK RNHGPIPIVD DIERYSVSVR GLIENPKMLS MKDIWDLPKY DVTATLQCAG
101: NRRTAMSKVR TVKGVGWDIA AIGNAVWGGA KLADVLELVG IPKFTSTTQS GGKHVEFVSV DMCKEENGGP YKASIPLSQA SNPEADVLLA YEMNGEPLNR
201: DHGYPLRVIV PGVIGARSVK WLDSINIIAE PCQGFFMQKD YKMFPPSVNW DNIEWSTRRP IMDFPIQCAI CSLEDINVIK HGKITVSGYA AAGGGRGVER
301: VDISVDGGKT WVEASRYQKP GIPYVSDDEN NDKWAWVLFE AKVDAPHSTE IVAKAVDTAA NVQPESVEEI WNLRGVLNTS WHKVQVRVGH SAM

Best Arabidopsis Sequence Match ( AT3G01910.1 )
(BLAST)

001: MPGIRGPSEY SQEPPRHPSL KVNAKEPFNA EPPRSALVSS YVTPVDLFYK RNHGPIPIVD HLQSYSVTLT GLIQNPRKLF IKDIRSLPKY NVTATLQCAG
101: NRRTAMSKVR NVRGVGWDVS AIGNAVWGGA KLADVLELVG IPKLTASTNL GARHVEFVSV DRCKEENGGP YKASITLSQA TNPEADVLLA YEMNGETLNR
201: DHGFPLRVVV PGVIGARSVK WLDSINVIAE ESQGFFMQKD YKMFPPSVNW DNINWSSRRP QMDFPVQSAI CSVEDVQMVK PGKVSIKGYA VSGGGRGIER
301: VDISLDGGKN WVEASRTQEP GKQYISEHSS SDKWAWVLFE ATIDVSQTTE VIAKAVDSAA NVQPENVESV WNLRGVLNTS WHRVLLRLGH SNL

Arabidopsis Description

SOXSulfite oxidase [Source:UniProtKB/TrEMBL;Acc:Q0WWA1]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.