Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95913 | Canola | cytosol, mitochondrion, plastid | 9.78 | 7.5 |
| CDY00108 | Canola | extracellular | 9.78 | 7.5 |
| CDY01759 | Canola | cytosol, mitochondrion, plastid | 9.78 | 7.5 |
| CDY20010 | Canola | cytosol, mitochondrion, plastid | 9.78 | 7.5 |
| CDY46432 | Canola | cytosol | 9.78 | 7.5 |
| CDY65271 | Canola | cytosol | 9.78 | 7.5 |
| CDY04284 | Canola | cytosol, mitochondrion, plastid | 8.7 | 6.67 |
| CDY07341 | Canola | extracellular | 8.7 | 6.67 |
| CDY44081 | Canola | cytosol, mitochondrion, plastid | 8.7 | 6.67 |
| CDY68374 | Canola | cytosol, mitochondrion, plastid | 8.7 | 6.67 |
Protein Annotations
| EnsemblPlants:CDY44427 | EnsemblPlantsGene:GSBRNA2T00080114001 | ProteinID:CDY44427 | ProteinID:CDY44427.1 | UniParc:UPI0004EDE6D9 | UniProt:A0A078I317 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA02g29500DBnaA02g29500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I317]
Coordinates
chrLK032588:+:218824..219372
Molecular Weight (calculated)
10650.9 Da
IEP (calculated)
9.070
GRAVY (calculated)
-0.529
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MEIEQGKELL LEPKTVTEKS YFCTHSIATV AVPKAFTRRR EAKDMHMYAD LTNHLSILFE DGVITMSTNK ATKEKKADVH KEYWKVSFKT NL
001: MKLDTSGFET SMPMIGFGSS SDMLDELSSV PSFDLPRTKE FDGFQKKAKD MLKHAKGTTT LAFIFKGGVM VAADSRASMG GYISVSSLKN SSKNMHPFDI
101: VDFGRNTTSQ SVKKIIEINP YMLGTMAGGA ADCQFWHRNL GIKCRLHELA NKRRISVSGA SKLLANMLYS YRGMGLSVGT MIAGWDETGP GLYYVDNEGG
201: RLKGDRFSVG SGSPYAYGVL DSGYKYDMSV EEASELARRS IYHATFRDGA SGGVASVYHV GPEGWTKLSG DDVGELHYHY YPVAPATAEQ VMEEATAE
101: VDFGRNTTSQ SVKKIIEINP YMLGTMAGGA ADCQFWHRNL GIKCRLHELA NKRRISVSGA SKLLANMLYS YRGMGLSVGT MIAGWDETGP GLYYVDNEGG
201: RLKGDRFSVG SGSPYAYGVL DSGYKYDMSV EEASELARRS IYHATFRDGA SGGVASVYHV GPEGWTKLSG DDVGELHYHY YPVAPATAEQ VMEEATAE
Arabidopsis Description
PBE120S proteasome beta subunit E1 [Source:UniProtKB/TrEMBL;Acc:F4HP14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.