CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53049	Canola	cytosol	87.5	28.41
CDY47220	Canola	cytosol	87.5	28.41
CDY70026	Canola	cytosol	10.61	6.95
CDY35578	Canola	cytosol, mitochondrion	7.95	6.46
CDY66849	Canola	cytosol	4.55	4.53
CDY44613	Canola	cytosol, nucleus, peroxisome, plastid	4.55	4.33
CDY22817	Canola	cytosol	20.45	3.13
CDY25197	Canola	cytosol	20.08	2.85
CDY48864	Canola	cytosol	18.56	2.52
CDY29353	Canola	cytosol	18.56	2.51
CDY64591	Canola	cytosol	18.56	2.51
CDY43786	Canola	cytosol	4.17	0.98
CDX84486	Canola	cytosol	4.17	0.98
CDY31337	Canola	cytosol	4.17	0.98
CDY39828	Canola	cytosol	4.17	0.97
CDY44616	Canola	cytosol	0.76	0.97
CDY48094	Canola	cytosol	1.52	0.3

Protein Annotations

Gene3D:1.25.40.70	MapMan:22.5.1.1	MapMan:27.5.1.1	Gene3D:3.30.1010.10	GO:A0A078I196	UniProt:A0A078I196
InterPro:ARM-type_fold	EnsemblPlants:CDY44615	ProteinID:CDY44615	ProteinID:CDY44615.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0046854	GO:GO:0048015	EnsemblPlantsGene:GSBRNA2T00080561001	InterPro:IPR000403	InterPro:IPR001263
InterPro:Kinase-like_dom_sf	PFAM:PF00613	InterPro:PI3/4_kinase_CS	InterPro:PI3/4_kinase_cat_dom	InterPro:PI_Kinase	InterPro:PInositide-3_kin_accessory_dom
ScanProsite:PS00915	PFscan:PS50290	PFscan:PS51545	PANTHER:PTHR10048	PANTHER:PTHR10048:SF62	SMART:SM00145
SUPFAM:SSF48371	SUPFAM:SSF56112	UniParc:UPI0004EDAE89	:	:	:

Description

BnaCnng11640DBnaCnng11640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I196]

Coordinates

chrLK032596:+:187737..189544

Molecular Weight (calculated)

30598.8 Da

IEP (calculated)

5.287

GRAVY (calculated)

-0.304

Length

264 amino acids

Sequence
(BLAST)

001: MTEKRALTKF LRCVECSDVQ EAKQAIQLMY KWETIDVCDA LELLSPLFQS EEVRAFAVSV LERADDEELQ CYLLQLVQAI RFERSDRSRL SQFLVERALR
101: NIELASYFRW YVNVELTDHV YNTRYHSTYS LLEESMSKLP PGVNGEDGSK LWQSLVRQTE LTAQLCTITR EVRNIRGNTQ KKIDKLKQLL SEILSELTYF
201: EEPLRSPLTP SVIIKGIVPG ESSLFKSQLN SLRLAFRTED EGTCKVIFKK GDDLRQDQLV VQMV

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.