CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53049	Canola	cytosol	91.75	23.25
CDY47220	Canola	cytosol	91.75	23.25
CDY70026	Canola	cytosol	26.21	13.4
CDY35578	Canola	cytosol, mitochondrion	16.99	10.77
CDY43786	Canola	cytosol	28.16	5.17
CDX84486	Canola	cytosol	28.16	5.17
CDY31337	Canola	cytosol	27.18	4.98
CDY39828	Canola	cytosol	27.18	4.95
CDY44613	Canola	cytosol, nucleus, peroxisome, plastid	4.85	3.61
CDY22817	Canola	cytosol	26.21	3.13
CDY66849	Canola	cytosol	3.88	3.02
CDY25197	Canola	cytosol	25.73	2.85
CDY48864	Canola	cytosol	26.21	2.77
CDY29353	Canola	cytosol	26.21	2.77
CDY64591	Canola	cytosol	26.21	2.77
CDY44615	Canola	cytosol	0.97	0.76
CDY48094	Canola	cytosol	2.91	0.45

Protein Annotations

Gene3D:1.10.1070.11	MapMan:22.5.1.1	MapMan:27.5.1.1	GO:A0A078I412	UniProt:A0A078I412	EnsemblPlants:CDY44616
ProteinID:CDY44616	ProteinID:CDY44616.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046854	GO:GO:0048015
EnsemblPlantsGene:GSBRNA2T00080562001	InterPro:IPR000403	InterPro:IPR036940	InterPro:Kinase-like_dom_sf	PFAM:PF00454	InterPro:PI3/4_kinase_CS
InterPro:PI3/4_kinase_cat_dom	InterPro:PI3/4_kinase_cat_sf	InterPro:PI_Kinase	ScanProsite:PS00916	PFscan:PS50290	PANTHER:PTHR10048
PANTHER:PTHR10048:SF62	SMART:SM00146	SUPFAM:SSF56112	UniParc:UPI0004EE4E0D	:	:

Description

BnaCnng11650DBnaCnng11650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I412]

Coordinates

chrLK032596:+:189629..190628

Molecular Weight (calculated)

23773.8 Da

IEP (calculated)

5.268

GRAVY (calculated)

-0.056

Length

206 amino acids

Sequence
(BLAST)

001: MLEFIPSRPL AQILSENRSI TSYLQKFHPD EHAPFGITAT CLDTFIKSCA GYSVITYILW IGDRHLDNLL LTDDGRLFHV DFAFILGRDP KPFPPPMKLC
101: KEMLEAMGGA DSQYYTRFKS YCCEAYNILR KPSNLILNLF YLMAGSTIPD IASDPEKGIL KLQEKFRLDM DDEACIHFFQ DLINESVSAL FPQMVETIHR
201: WAQYWL

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.