CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX89065
CDY48367

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60490.1	CDX89065	AT3G60630.1	21798944
AT1G60490.1	CDY48367	AT3G60630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027152.1-P	Field mustard	cytosol	87.21	99.58
CDY47220	Canola	cytosol	97.91	97.91
AT1G60490.1	Thale cress	cytosol	92.25	92.14
CDY44616	Canola	cytosol	23.25	91.75
CDY44615	Canola	cytosol	28.41	87.5
KXG24803	Sorghum	cytosol	15.38	83.89
VIT_01s0127g00430.t01	Wine grape	cytosol	81.8	81.6
KRH62223	Soybean	cytosol	81.43	81.33
Solyc04g015350.2.1	Tomato	cytosol	80.32	80.12
KRH52943	Soybean	cytosol	79.58	79.68
GSMUA_Achr1P21120_001	Banana	cytosol	77.12	70.93
TraesCS5A01G054400.1	Wheat	cytosol, plastid	70.85	69.99
TraesCS5D01G065700.1	Wheat	cytosol, plastid	70.36	69.5
Os05t0180600-02	Rice	cytosol	69.25	69.16
Zm00001d050219_P004	Maize	cytosol, plasma membrane	69.5	68.15
TraesCS5B01G062000.3	Wheat	cytosol, plastid	70.85	67.37
HORVU5Hr1G013230.1	Barley	cytosol, plastid	70.73	64.25
Os08t0307400-02	Rice	cytosol	57.56	56.59
CDY70026	Canola	cytosol	11.69	23.57
CDY44613	Canola	cytosol, nucleus, peroxisome, plastid	7.13	20.94
CDY35578	Canola	cytosol, mitochondrion	7.63	19.08
CDY66849	Canola	cytosol	6.03	18.49
CDX84486	Canola	cytosol	12.79	9.27
CDY43786	Canola	cytosol	12.79	9.27
CDY31337	Canola	cytosol	12.55	9.07
CDY39828	Canola	cytosol	12.55	9.01
CDY22817	Canola	cytosol	19.07	8.98
CDY25197	Canola	cytosol	18.94	8.27
CDY48864	Canola	cytosol	18.7	7.81
CDY29353	Canola	cytosol	18.57	7.74
CDY64591	Canola	cytosol	18.57	7.74
CDY48094	Canola	cytosol	5.41	3.27

Protein Annotations

Gene3D:1.10.1070.11	Gene3D:1.25.40.70	Gene3D:2.60.40.150	MapMan:22.5.1.1	MapMan:27.5.1.1	Gene3D:3.30.1010.10
GO:A0A078IUF8	UniProt:A0A078IUF8	InterPro:ARM-type_fold	InterPro:C2_domain_sf	EnsemblPlants:CDY53049	ProteinID:CDY53049
ProteinID:CDY53049.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016303
GO:GO:0016310	GO:GO:0016740	GO:GO:0036092	GO:GO:0046854	GO:GO:0048015	EnsemblPlantsGene:GSBRNA2T00008465001
InterPro:IPR000403	InterPro:IPR001263	InterPro:IPR002420	InterPro:IPR035892	InterPro:IPR036940	InterPro:Kinase-like_dom_sf
PFAM:PF00454	PFAM:PF00613	PFAM:PF00792	InterPro:PI3/4_kinase_CS	InterPro:PI3/4_kinase_cat_dom	InterPro:PI3/4_kinase_cat_sf
InterPro:PI3K_C2_dom	InterPro:PI3K_Vps34	PIRSF:PIRSF000587	InterPro:PI_Kinase	InterPro:PInositide-3_kin_accessory_dom	ScanProsite:PS00915
ScanProsite:PS00916	PFscan:PS50290	PFscan:PS51545	PFscan:PS51547	PANTHER:PTHR10048	PANTHER:PTHR10048:SF62
SMART:SM00142	SMART:SM00145	SMART:SM00146	SUPFAM:SSF48371	SUPFAM:SSF49562	SUPFAM:SSF56112
UniParc:UPI0004EE95D0	SEG:seg	:	:	:	:

Description

BnaA09g14140DBnaA09g14140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUF8]

Coordinates

chrLK033159:+:23688..28264

Molecular Weight (calculated)

93177.3 Da

IEP (calculated)

6.742

GRAVY (calculated)

-0.293

Length

813 amino acids

Sequence
(BLAST)

001: MGASEFRFFL SCDLNSPVTF RIEKLDGTLP VEKSTDSGVI SGAEDKRPEL YVECALYIDG APFGLPMRTR LNTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK GEGLIGGATI LLFNSKMQMK SGKQKLRLWK GKEADGSFPT STPGKAPRHE RGELERLEKL MNKFERGQIQ SIDWLDRLLL KSLDKIKEQE
201: SSKHGNSYLY LVVDFCSFEH RVVFQESGAN LLITSPIGST NEFVTVWDTE LGKFNPSEHK QLKLARSLDR GIIDRDLKPS NTERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWETID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSRLSQFLVQ RALQNIQLAS FFRWYVAVEL TDHVYNKRYF STYDLLEQSM KKLPPDVNGE DGNKLWQSLV GQTGLTAQLV SITREVRNVR GNTQKKIEKL
501: RQLLSGLLSE LTYFEEPIRS PLTPSVLIKG IVPGESTLFK SQLNPLMLAF RTEDEGSCKV IFKKGDDLRQ DQLVVQMVWL MDRLLKLENL DLCLTPYKVL
601: ATGHDEGMLE FIPSRSLAQI LSEHRSITSY LQKFHPDEHA PFGITATCLE TFIKSCAGYS VITYILGIGD RHLDNLLLTD DGRLFHVDFA FILGRDPKPF
701: PPPMKLCKEM VEAMGGAESQ YYTRFKSYCC EAYNILRKSS NLILNLFYLM AGSTIPDIAS DPEKGILKLQ EKFRLDMDDE ACIHFFQDLI NESVSALFPQ
801: MVETIHRWAQ YWR

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.