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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_15s0048g00270.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60490.1 VIT_15s0048g00270.t01 AT3G60630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH62223 Soybean cytosol 88.83 88.94
Solyc04g015350.2.1 Tomato cytosol 88.71 88.71
KRH52943 Soybean cytosol 86.99 87.32
Bra027152.1-P Field mustard cytosol 73.99 84.69
AT1G60490.1 Thale cress cytosol 82.94 83.05
CDY47220 Canola cytosol 81.84 82.04
CDY53049 Canola cytosol 81.6 81.8
KXG24803 Sorghum cytosol 14.85 81.21
GSMUA_Achr1P21120_001 Banana cytosol 82.82 76.36
Os05t0180600-02 Rice cytosol 73.99 74.08
TraesCS5D01G065700.1 Wheat cytosol, plastid 74.72 74.0
TraesCS5A01G054400.1 Wheat cytosol, plastid 74.48 73.75
Zm00001d050219_P004 Maize cytosol, plasma membrane 72.39 71.17
TraesCS5B01G062000.3 Wheat cytosol, plastid 74.48 70.99
HORVU5Hr1G013230.1 Barley cytosol, plastid 74.36 67.71
Os08t0307400-02 Rice cytosol 59.02 58.16
VIT_04s0044g01210.t01 Wine grape cytosol 11.29 8.62
VIT_03s0063g02260.t01 Wine grape cytosol 19.88 7.96
Protein Annotations
Gene3D:1.10.1070.11Gene3D:1.25.40.70EntrezGene:100263708wikigene:100263708Gene3D:2.60.40.150MapMan:22.5.1.1
MapMan:27.5.1.1Gene3D:3.30.1010.10InterPro:ARM-type_foldInterPro:C2_domain_sfProteinID:CBI28550ProteinID:CBI28550.3
UniProt:D7TDH7EMBL:FN595761GO:GO:0000045GO:GO:0000166GO:GO:0000407GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005525GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005768GO:GO:0005777GO:GO:0006464GO:GO:0006468
GO:GO:0006629GO:GO:0006810GO:GO:0006897GO:GO:0006950GO:GO:0007154GO:GO:0007165
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009628
GO:GO:0009651GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0016197GO:GO:0016301
GO:GO:0016303GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0030242GO:GO:0034271
GO:GO:0034272GO:GO:0036092GO:GO:0046854GO:GO:0048015GO:GO:0055046GO:GO:0072593
InterPro:IPR000403InterPro:IPR001263InterPro:IPR002420InterPro:IPR035892InterPro:IPR036940InterPro:Kinase-like_dom_sf
EntrezGene:LOC100263708wikigene:LOC100263708PFAM:PF00454PFAM:PF00613PFAM:PF00792InterPro:PI3/4_kinase_CS
InterPro:PI3/4_kinase_cat_domInterPro:PI3/4_kinase_cat_sfInterPro:PI3K_C2_domInterPro:PI3K_Vps34PIRSF:PIRSF000587InterPro:PI_Kinase
InterPro:PInositide-3_kin_accessory_domScanProsite:PS00915ScanProsite:PS00916PFscan:PS50290PFscan:PS51545PFscan:PS51547
PANTHER:PTHR10048PANTHER:PTHR10048:SF62SMART:SM00142SMART:SM00145SMART:SM00146SUPFAM:SSF48371
SUPFAM:SSF49562SUPFAM:SSF56112UniParc:UPI00015CCBECArrayExpress:VIT_01s0127g00430EnsemblPlantsGene:VIT_01s0127g00430EnsemblPlants:VIT_01s0127g00430.t01
unigene:Vvi.10483RefSeq:XP_002267769RefSeq:XP_002267769.2RefSeq:XP_010651488.1SEG:seg:
Description
No Description!
Coordinates
chr1:+:7763505..7789707
Molecular Weight (calculated)
93335.9 Da
IEP (calculated)
6.922
GRAVY (calculated)
-0.255
Length
815 amino acids
Sequence
(BLAST)
001: MSGNEFRFFL SCDINLPVTF RIERLEGNLP SVKSSISEFD YTTEERRAEL YVECALFIDG APFGLPTRTR LESTGPSYCW NELITLSTKY RDLTAHSQLA
101: LTVWDVSCGK DEGLIGGATI LLFSSKKQLK TGKQKLRLWP GKEADGSFPT TTPGKVPRHE RGELERLEKL MNKYERGQIQ RVDWLDRLTF KAMEKIKERE
201: SCKNGSSHLY LVVDFCSFEH RVVFQESGAN FFLPSPPIAS TNELVIVWDP EVGKMNPSEH KQLKLARSLA RGIIDRDLKP SNNERKSIQR ILKYPPTRIL
301: SGDEKQLLWK FRFSLMSEKR ALTKFLRCVE WSDLQEAKQA LELMGKWEMI DVCDALELLS PVFESEEVRA YAVSVLERAD DEELQCYLLQ LVQALRFERS
401: DKSRLCHFLV QRSLRNIELA SFLRWYVTVE LNDPAYAKRF YCTYEILEDN MMKLGAGANG DEDGLKLWQS LVRQTELTAQ LCLIMRDVRT VRGGTQKKIE
501: KLRQLLSGLL SELTYFEEPI RSPVAPGVLI TGIVPSESSI FKSALHPLRL TFRTASGGSC KIIFKKGDDI RQDQLVVQMV SLMDRLLKLE NLDLHLTPYR
601: VLATGQDEGM LEFIPSSSLA QILSEHRSII SYLQKFHPDE HGPFGITATC LETFIKSCAG YSVITYILGI GDRHLDNLLL RDDGRLFHVD FGFILGRDPK
701: PFPPPMKLCK EMVEAMGGAE SPYYTRFKSY CCEAYNILRK SSNLILNLFH LMAGSNIPDI ASDPEKGILK LQEKFKLDLD DEACIHFFQD LINESVSALF
801: PQMVETIHRW AQYWR
Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)
001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR
Arabidopsis Description
ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.