CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87695
EER91968
EES05768
EES11245
OQU85680

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60490.1	EER87695	AT3G60630.1	21798944
AT1G60490.1	EER91968	AT3G60630.1	21798944
AT1G60490.1	EES05768	AT3G60630.1	21798944
AT1G60490.1	EES11245	AT3G60630.1	21798944
AT1G60490.1	OQU85680	AT3G60630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027152.1-P	Field mustard	cytosol	83.89	17.56
Zm00001d050219_P004	Maize	cytosol, plasma membrane	93.96	16.89
Os05t0180600-02	Rice	cytosol	87.92	16.09
CDY47220	Canola	cytosol	83.89	15.38
CDY53049	Canola	cytosol	83.89	15.38
AT1G60490.1	Thale cress	cytosol	83.89	15.36
Solyc04g015350.2.1	Tomato	cytosol	83.22	15.21
TraesCS5A01G054400.1	Wheat	cytosol, plastid	83.22	15.07
TraesCS5D01G065700.1	Wheat	cytosol, plastid	83.22	15.07
KRH52943	Soybean	cytosol	81.21	14.9
KRH62223	Soybean	cytosol	81.21	14.86
VIT_01s0127g00430.t01	Wine grape	cytosol	81.21	14.85
TraesCS5B01G062000.3	Wheat	cytosol, plastid	83.89	14.62
GSMUA_Achr1P21120_001	Banana	cytosol	83.22	14.03
HORVU5Hr1G013230.1	Barley	cytosol, plastid	83.89	13.97
EES08386	Sorghum	cytosol	26.85	3.33
KXG37740	Sorghum	cytosol	25.5	1.97

Protein Annotations

Gene3D:1.10.1070.11	MapMan:35.1	UniProt:A0A1B6PGJ1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046854
GO:GO:0048015	InterPro:IPR000403	InterPro:IPR036940	EnsemblPlants:KXG24803	ProteinID:KXG24803	ProteinID:KXG24803.1
InterPro:Kinase-like_dom_sf	PFAM:PF00454	InterPro:PI3/4_kinase_cat_dom	InterPro:PI3/4_kinase_cat_sf	InterPro:PI_Kinase	PFscan:PS50290
PANTHER:PTHR10048	PANTHER:PTHR10048:SF62	SMART:SM00146	EnsemblPlantsGene:SORBI_3007G088100	SUPFAM:SSF56112	UniParc:UPI00081AE08C

Description

hypothetical protein

Coordinates

chr7:+:12107574..12109364

Molecular Weight (calculated)

17302.8 Da

IEP (calculated)

5.251

GRAVY (calculated)

-0.278

Length

149 amino acids

Sequence
(BLAST)

001: MTSGKISWHL DNLLLTDDGR LFHVDFAFIL GRDPKPFPPP MKLCKEMVEA MGGAESQYYT RFKSYCCEAY NILRKSSSLI LNLFKLMERS GIPDISADES
101: GGLKLQEKFR LDLDDEEAIH FFQDLINESV SALFPQMVET IHRWAQYWR

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.