Factsheet for HORVU5Hr1G013230.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G053510.1
HORVU4Hr1G087700.2
HORVU6Hr1G063650.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60490.1	HORVU1Hr1G053510.1	AT3G60630.1	21798944
AT1G60490.1	HORVU4Hr1G087700.2	AT3G60630.1	21798944
AT1G60490.1	HORVU6Hr1G063650.1	AT3G60630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G054400.1	Wheat	cytosol, plastid	89.39	97.21
TraesCS5D01G065700.1	Wheat	cytosol, plastid	87.04	94.65
TraesCS5B01G062000.3	Wheat	cytosol, plastid	88.38	92.51
KXG24803	Sorghum	cytosol	13.97	83.89
Os05t0180600-02	Rice	cytosol	74.75	82.19
Zm00001d050219_P004	Maize	cytosol, plasma membrane	74.3	80.22
VIT_01s0127g00430.t01	Wine grape	cytosol	67.71	74.36
KRH62223	Soybean	cytosol	67.37	74.08
Solyc04g015350.2.1	Tomato	cytosol	67.37	73.99
KRH52943	Soybean	cytosol	67.04	73.89
Bra027152.1-P	Field mustard	cytosol	58.44	73.46
CDY53049	Canola	cytosol	64.25	70.73
CDY47220	Canola	cytosol	64.13	70.6
AT1G60490.1	Thale cress	cytosol	64.13	70.52
GSMUA_Achr1P21120_001	Banana	cytosol	69.39	70.25
HORVU4Hr1G017010.6	Barley	cytosol	11.28	8.44
HORVU4Hr1G007450.5	Barley	cytosol	16.65	7.74

Protein Annotations

Gene3D:1.10.1070.11	Gene3D:1.25.40.70	Gene3D:2.60.40.150	MapMan:22.5.1.1	MapMan:27.5.1.1	Gene3D:3.30.1010.10
UniProt:A0A287QE87	InterPro:ARM-type_fold	InterPro:C2_domain_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006629	GO:GO:0006810	GO:GO:0006897	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0016301	GO:GO:0016303	GO:GO:0016310	GO:GO:0016740	GO:GO:0036092
GO:GO:0046854	GO:GO:0048015	GO:GO:0055046	GO:GO:0072593	EnsemblPlantsGene:HORVU5Hr1G013230	EnsemblPlants:HORVU5Hr1G013230.1
InterPro:IPR000403	InterPro:IPR001263	InterPro:IPR002420	InterPro:IPR035892	InterPro:IPR036940	InterPro:Kinase-like_dom_sf
PFAM:PF00454	PFAM:PF00613	PFAM:PF00792	InterPro:PI3/4_kinase_CS	InterPro:PI3/4_kinase_cat_dom	InterPro:PI3/4_kinase_cat_sf
InterPro:PI3K_C2_dom	InterPro:PI3K_Vps34	PIRSF:PIRSF000587	InterPro:PI_Kinase	InterPro:PInositide-3_kin_accessory_dom	ScanProsite:PS00915
ScanProsite:PS00916	PFscan:PS50290	PFscan:PS51545	PFscan:PS51547	PANTHER:PTHR10048	PANTHER:PTHR10048:SF62
SMART:SM00142	SMART:SM00145	SMART:SM00146	SUPFAM:SSF48371	SUPFAM:SSF49562	SUPFAM:SSF56112
UniParc:UPI000B46C2E3	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:42125848..42133347

Molecular Weight (calculated)

101488.0 Da

IEP (calculated)

6.965

GRAVY (calculated)

-0.327

Length

895 amino acids

Sequence
(BLAST)

001: PAHPQESSVL SVSVSTTLLR PSPFPRAETR QPARHLPAVF PTKKPPRRRD RSVPLGSPPP LAGRPPRPSM AAAAAVGISR TSAAGAGSSN INSSEFRFFL
101: SCDISLPLTF RVLQAPIPPP AQDGLDKKVS ELFVECKLYI DGIQFGLPVN TRLESSGPPY CWNELITLCT KYRDLTSLAQ LAFTVWDVSS GEGKSVVGGA
201: TIFLFNSKKQ LKTGKQKLQL WPQKEADGRV PTTTPGKVPK NERGEIERLE RLVNKYERGQ IQHVDWLDRL AFSAIDKVKE KECERLENSF SSLVVEFCSF
301: EHRVVFQESG ANFYAPTPVS LSNELVTVWD PELGRTNPSE HKQLKLARSL TRGIIDKDLK PSSNERKSLQ KIIKCPPTRT ILPDEKQLVW KFRFSLMSEK
401: KALTKFLRSV DWSDIQEAKQ AVELMGKWET IDVADALELL SSDFNSEEVR AYAVSVLERA DDEELQCYLL QLVQALRFER SDKSRLAHFL VNRALSNIEI
501: ASFLRWYVVV ELHDHAYAKR YYSTYDMLED EMMKMVARED GDEDGFRLWQ SLSRQTELTA QLCSIMKDVR NTRGNAEKKI EKLRQLLSGV HSELTHFDEP
601: IRSPLAPTLL LTGVVPQESS IFKSSLIPLR LTFKTANGGT SKMIFKKGDD LRQDQLVIQM VSLMDRLLKL ENMDLHLTPY QVLATGQDEG MVEFIPSSPL
701: AQIISEHRSI TSYLQKFHPD EDGPFGITVQ CLETFIKSCA GYSVITYIMG VGDRHLDNLL IRDDGCLFHV DFGFILGRDP KPFPPPMKLC KEMVEAMGGT
801: ESQYYTRFKS YCCEAYNILR NNSSLILNLF TLMERSSIPD ISTDENATLK VQEKFRLDLD DEEAIHFFQG LINDSVSALF PQMVETIHRW AQYWR

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.