Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24803 | Sorghum | cytosol | 16.89 | 93.96 |
| TraesCS5A01G054400.1 | Wheat | cytosol, plastid | 80.1 | 80.68 |
| TraesCS5D01G065700.1 | Wheat | cytosol, plastid | 79.86 | 80.44 |
| Os05t0180600-02 | Rice | cytosol | 78.77 | 80.22 |
| TraesCS5B01G062000.3 | Wheat | cytosol, plastid | 80.34 | 77.89 |
| HORVU5Hr1G013230.1 | Barley | cytosol, plastid | 80.22 | 74.3 |
| VIT_01s0127g00430.t01 | Wine grape | cytosol | 71.17 | 72.39 |
| Solyc04g015350.2.1 | Tomato | cytosol | 70.81 | 72.02 |
| Bra027152.1-P | Field mustard | cytosol | 61.76 | 71.91 |
| KRH62223 | Soybean | cytosol | 70.57 | 71.87 |
| KRH52943 | Soybean | cytosol | 69.48 | 70.94 |
| CDY53049 | Canola | cytosol | 68.15 | 69.5 |
| CDY47220 | Canola | cytosol | 68.15 | 69.5 |
| AT1G60490.1 | Thale cress | cytosol | 68.03 | 69.29 |
| GSMUA_Achr1P21120_001 | Banana | cytosol | 72.5 | 67.99 |
| Zm00001d013442_P061 | Maize | cytosol | 17.49 | 7.4 |
| Zm00001d004249_P001 | Maize | mitochondrion | 1.69 | 7.37 |
| Zm00001d049076_P001 | Maize | cytosol | 11.1 | 7.26 |
| Zm00001d007520_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 2.53 | 3.58 |
| Zm00001d030412_P001 | Maize | cytosol | 1.69 | 2.41 |
Protein Annotations
Description
phosphatidylinositol 3-kinase1Phosphatidylinositol 3-kinase VPS34
Coordinates
chr4:+:74335082..74344859
Molecular Weight (calculated)
94868.4 Da
IEP (calculated)
7.479
GRAVY (calculated)
-0.211
Length
829 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGGNEFRF FLSCDISHPL AFRVLHAEHI LLTDQKVPEL FVECKLYIDG IQFGLPVKTR LEPSGPKYCW NELITLSTKY RDLTSLSQLA FTVWDVSSGE
101: NPEVVGGATI FLFNSKRQLK TGRQKLRLWP TKEADGGVPT TTPGKVPRNE RGEIERLERL VNKYERGQIQ HVDWLDRLAF SAMDKAMEKE CERKANLYPS
201: LVVELCSFEH RIVFQESGAN FYTPAPVSLS NELVTVWDPE LGRTNPSEHK QLKLARSLTR GIVDRDLKPS SNERKLLQTI IKFPPTRTLE VDEKQLVWKF
301: RFSLMSEKKA LTKFVRSVDW SDNQVSKRNS YVNVLFLFCN FIFGFAGLSN NCFSAKVRGY AVSVLERADD EELQCYLLQL VQALRFERSD KSRLALFLVN
401: RALSNIEIAS FLRWYILVEL HSPAYARRYY GTYDMLENSM MKLVGREDGD EDGFRLWQSL TRQTDLTAQL CSIMKDVRNV RGSAQKKIEK LRQLLSGVFS
501: ELTNFDEPIR SPLAPTLLLT GVVPQESSIF KSALNPLRLT FKTANGGTSK IIYKKGDDLR QDQLVIQTVS LMDRLLKLEN LDLHLTPYRV LATGQDEGML
601: EFISSSSLAQ ILSEHRSITS YLQKFHPDED GPFGITAQCL ETFIKSCAGY SVITYILGVG DRFVFLTSSG LKHLFDSNLM VCFLLYVMHL DNLLLTDDGR
701: LFHVDFAFIL GRDPKPFPPP MKLCKEMVEA MGGAESQYYT RFKSYCCEAY NILRKSSSLI LNLFKLMERS GIPDISADES GGLKLQEKFR LDLDDEEAIH
801: FFQDLINDSV SALFPQMVET IHRWAQYWR
101: NPEVVGGATI FLFNSKRQLK TGRQKLRLWP TKEADGGVPT TTPGKVPRNE RGEIERLERL VNKYERGQIQ HVDWLDRLAF SAMDKAMEKE CERKANLYPS
201: LVVELCSFEH RIVFQESGAN FYTPAPVSLS NELVTVWDPE LGRTNPSEHK QLKLARSLTR GIVDRDLKPS SNERKLLQTI IKFPPTRTLE VDEKQLVWKF
301: RFSLMSEKKA LTKFVRSVDW SDNQVSKRNS YVNVLFLFCN FIFGFAGLSN NCFSAKVRGY AVSVLERADD EELQCYLLQL VQALRFERSD KSRLALFLVN
401: RALSNIEIAS FLRWYILVEL HSPAYARRYY GTYDMLENSM MKLVGREDGD EDGFRLWQSL TRQTDLTAQL CSIMKDVRNV RGSAQKKIEK LRQLLSGVFS
501: ELTNFDEPIR SPLAPTLLLT GVVPQESSIF KSALNPLRLT FKTANGGTSK IIYKKGDDLR QDQLVIQTVS LMDRLLKLEN LDLHLTPYRV LATGQDEGML
601: EFISSSSLAQ ILSEHRSITS YLQKFHPDED GPFGITAQCL ETFIKSCAGY SVITYILGVG DRFVFLTSSG LKHLFDSNLM VCFLLYVMHL DNLLLTDDGR
701: LFHVDFAFIL GRDPKPFPPP MKLCKEMVEA MGGAESQYYT RFKSYCCEAY NILRKSSSLI LNLFKLMERS GIPDISADES GGLKLQEKFR LDLDDEEAIH
801: FFQDLINDSV SALFPQMVET IHRWAQYWR
001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR
Arabidopsis Description
ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.