Factsheet for TraesCS5B01G062000.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G209400.1
TraesCS1B01G223400.1
TraesCS1D01G212800.1
TraesCS4A01G482000.1
TraesCS4B01G367300.1
TraesCS4D01G360200.1
TraesCS5A01G535000.1
TraesCS6A01G247200.1
TraesCS6B01G277400.1
TraesCS6D01G229400.1
TraesCS7A01G014200.1
TraesCS7D01G011400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60490.1	TraesCS1A01G209400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS1B01G223400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS1D01G212800.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS4A01G482000.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS4B01G367300.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS4D01G360200.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS5A01G535000.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS6A01G247200.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS6B01G277400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS6D01G229400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS7A01G014200.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS7D01G011400.1	AT3G60630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G054400.1	Wheat	cytosol, plastid	94.85	98.54
TraesCS5D01G065700.1	Wheat	cytosol, plastid	91.46	95.02
HORVU5Hr1G013230.1	Barley	cytosol, plastid	92.51	88.38
KXG24803	Sorghum	cytosol	14.62	83.89
Os05t0180600-02	Rice	cytosol	78.71	82.68
Zm00001d050219_P004	Maize	cytosol, plasma membrane	77.89	80.34
VIT_01s0127g00430.t01	Wine grape	cytosol	70.99	74.48
KRH62223	Soybean	cytosol	70.76	74.32
KRH52943	Soybean	cytosol	70.41	74.14
Solyc04g015350.2.1	Tomato	cytosol	70.06	73.5
Bra027152.1-P	Field mustard	cytosol	61.05	73.31
CDY53049	Canola	cytosol	67.37	70.85
CDY47220	Canola	cytosol	67.37	70.85
AT1G60490.1	Thale cress	cytosol	67.13	70.52
GSMUA_Achr1P21120_001	Banana	cytosol	72.63	70.25
TraesCS4B01G105400.1	Wheat	cytosol	11.46	8.17
TraesCS4B01G045900.1	Wheat	cytosol	17.89	7.96

Protein Annotations

Gene3D:1.10.1070.11	Gene3D:1.25.40.70	Gene3D:2.60.40.150	MapMan:22.5.1.1	MapMan:27.5.1.1	Gene3D:3.30.1010.10
InterPro:ARM-type_fold	InterPro:C2_domain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016303	GO:GO:0016740	GO:GO:0046854	GO:GO:0048015
InterPro:IPR000403	InterPro:IPR001263	InterPro:IPR002420	InterPro:IPR035892	InterPro:IPR036940	InterPro:Kinase-like_dom_sf
PFAM:PF00454	PFAM:PF00613	PFAM:PF00792	InterPro:PI3/4_kinase_CS	InterPro:PI3/4_kinase_cat_dom	InterPro:PI3/4_kinase_cat_sf
InterPro:PI3K_C2_dom	InterPro:PI3K_Vps34	PIRSF:PIRSF000587	InterPro:PI_Kinase	InterPro:PInositide-3_kin_accessory_dom	ScanProsite:PS00915
ScanProsite:PS00916	PFscan:PS50290	PFscan:PS51545	PFscan:PS51547	PANTHER:PTHR10048	PANTHER:PTHR10048:SF62
SMART:SM00142	SMART:SM00145	SMART:SM00146	SUPFAM:SSF48371	SUPFAM:SSF49562	SUPFAM:SSF56112
EnsemblPlantsGene:TraesCS5B01G062000	EnsemblPlants:TraesCS5B01G062000.3	TIGR:cd00870	TIGR:cd00896	TIGR:cd08397	SEG:seg

Description

No Description!

Coordinates

chr5B:-:69554459..69561414

Molecular Weight (calculated)

97101.6 Da

IEP (calculated)

6.199

GRAVY (calculated)

-0.264

Length

855 amino acids

Sequence
(BLAST)

001: MAAAAVGISR TSAAGAGSSN SSEFRFFLSC DISLPLTFRV LQAPIPPPAQ GAHSRSLPCP LSPHPQISLV FSSDLPFSCF LADGLDKKVS ELFVECKLYI
101: DGIQFGLPVN TRLESSGPPY CWNELITLCT KYRDLTSLAQ LAFTVWDVSS GEGKSVVGGA TIFLFNSKKQ LKTGKQKLQL WPQKEADGRV PTTTPGKVPK
201: NERGEIERLE RLVNKYERGQ IQHVDWLDRL AFSAIDKVKE KECERLENSF PSLVVEFCSF EHRVVFQESG ANFYAPTPVS LSNELVTVWD PELGRTNPSE
301: HKQLKLARSL TRGIIDKDLK PSSNERKSLQ RIIKCPPTRT ILPDEKQLVW KFRFSLMSEK KALTKFLRSV DWSDIQEAKQ AVELIGRWET IDVADALELL
401: SSDFKSEEVR AYAVSVLERA DDEELQCYLL QLVQALRFER SDKSRLAHFL VNRALSNIEI ASFLRWYVVV ELHDHAYAKR YYSTYDMLED EMMKMVARED
501: GDEDGFRLWQ SLSRQTELTA QLCSIMKDVR NTRGNAEKKI EKLRQLLSGV HSELTHFDEP IRSPLAPTLL LTGVVPQESS IFKSSLIPLR LTFKTANGGT
601: SKMIFKKGDD LRQDQLVIQM VSLMDRLLKL ENMDLHLTPY QVLATGQDEG MVEFIPSSPL AQIISEHRSI TSYLQKFHPD EDGPFGITAQ CLETFIKSCA
701: GYSVITYIMG VGDRHLDNLL IRDDGCLFHV DFGFILGRDP KPFPPPMKLC KEMVEAMGGT ESQYYTRFKS YCCEAYNILR NNSSLILNLF TLMERSSIPD
801: ISAEENATLK VQEKFRLDLD DEEAIHFFQG LINDSVSALF PQMVETIHRW AQYWR

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.