Factsheet for TraesCS5A01G054400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G209400.1
TraesCS1B01G223400.1
TraesCS1D01G212800.1
TraesCS4A01G482000.1
TraesCS4B01G367300.1
TraesCS4D01G360200.1
TraesCS5A01G535000.1
TraesCS6A01G247200.1
TraesCS6B01G277400.1
TraesCS6D01G229400.1
TraesCS7A01G014200.1
TraesCS7D01G011400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60490.1	TraesCS1A01G209400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS1B01G223400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS1D01G212800.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS4A01G482000.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS4B01G367300.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS4D01G360200.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS5A01G535000.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS6A01G247200.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS6B01G277400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS6D01G229400.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS7A01G014200.1	AT3G60630.1	21798944
AT1G60490.1	TraesCS7D01G011400.1	AT3G60630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G065700.1	Wheat	cytosol, plastid	95.26	95.26
TraesCS5B01G062000.3	Wheat	cytosol, plastid	98.54	94.85
HORVU5Hr1G013230.1	Barley	cytosol, plastid	97.21	89.39
KXG24803	Sorghum	cytosol	15.07	83.22
Os05t0180600-02	Rice	cytosol	81.77	82.68
Zm00001d050219_P004	Maize	cytosol, plasma membrane	80.68	80.1
VIT_01s0127g00430.t01	Wine grape	cytosol	73.75	74.48
KRH62223	Soybean	cytosol	73.39	74.2
KRH52943	Soybean	cytosol	73.03	74.01
Solyc04g015350.2.1	Tomato	cytosol	73.27	73.99
Bra027152.1-P	Field mustard	cytosol	63.67	73.6
CDY53049	Canola	cytosol	69.99	70.85
CDY47220	Canola	cytosol	69.87	70.73
AT1G60490.1	Thale cress	cytosol	69.87	70.64
GSMUA_Achr1P21120_001	Banana	cytosol	75.46	70.25
TraesCS4A01G201300.2	Wheat	cytosol	11.66	8.01
TraesCS4A01G268300.1	Wheat	cytosol	17.86	7.65

Protein Annotations

Gene3D:1.10.1070.11	Gene3D:1.25.40.70	Gene3D:2.60.40.150	MapMan:22.5.1.1	MapMan:27.5.1.1	Gene3D:3.30.1010.10
InterPro:ARM-type_fold	InterPro:C2_domain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0006629	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016303	GO:GO:0016740	GO:GO:0046854	GO:GO:0048015
InterPro:IPR000403	InterPro:IPR001263	InterPro:IPR002420	InterPro:IPR035892	InterPro:IPR036940	InterPro:Kinase-like_dom_sf
PFAM:PF00454	PFAM:PF00613	PFAM:PF00792	InterPro:PI3/4_kinase_CS	InterPro:PI3/4_kinase_cat_dom	InterPro:PI3/4_kinase_cat_sf
InterPro:PI3K_C2_dom	InterPro:PI3K_Vps34	PIRSF:PIRSF000587	InterPro:PI_Kinase	InterPro:PInositide-3_kin_accessory_dom	ScanProsite:PS00915
ScanProsite:PS00916	PFscan:PS50290	PFscan:PS51545	PFscan:PS51547	PANTHER:PTHR10048	PANTHER:PTHR10048:SF62
SMART:SM00142	SMART:SM00145	SMART:SM00146	SUPFAM:SSF48371	SUPFAM:SSF49562	SUPFAM:SSF56112
EnsemblPlantsGene:TraesCS5A01G054400	EnsemblPlants:TraesCS5A01G054400.1	TIGR:cd00870	TIGR:cd00896	TIGR:cd08397	SEG:seg

Description

No Description!

Coordinates

chr5A:+:51207516..51216196

Molecular Weight (calculated)

93755.6 Da

IEP (calculated)

6.058

GRAVY (calculated)

-0.295

Length

823 amino acids

Sequence
(BLAST)

001: MAAAAVGISR TSAAGAGSTN SSEFRFFLSC DISLPLTFRV LQAPIPPPAQ DGLDKKVSEL FVECKLYIDG IQFGLPVNTR LESSGPPYCW NELITLCTKY
101: RDLTSLAQLA FTVWDVSSGE GKSVVGGATI FLFNSKKQLK TGKQKLQLWP QKEADGRVPT TTPGKVPKNE RGEIERLERL VNKYERGQIQ HVDWLDRLAF
201: SAIDKVKEKE CERLENSFPS LVVEFCSFEH RVVFQESGAN FYAPTPVSLS NELVTVWDPE LGRTNPSEHK QLKLARSLTR GIIDKDLKPS SNERKSLQRI
301: IKCPPTRTIL PDEKQLVWKF RFSLMSEKKA LTKFLRSVDW SDIQEAKQAV ELMGKWETID VADALELLSS DFKSEEVRAY AVSVLERADD EELQCYLLQL
401: VQALRFERSD KSRLAHFLVN RALSNIEIAS FLRWYVVVEL HDHAYAKRYY STYDMLEDEM MKMIAREDGD EDGFRLWQSL SRQTELTAQL CSIMKDVRNT
501: RGNAEKKIEK LRQLLSGVHS ELTHFDEPIR SPLAPTLLLT GVVPQESSIF KSSLIPLRLT FKTANGGTSK MIFKKGDDLR QDQLVIQMVS LMDRLLKLEN
601: MDLHLTPYQV LATGQDEGMV EFIPSSPLAQ IISEHRSITS YLQKFHPDED GPFGITAQCL ETFIKSCAGY SVITYIMGVG DRHLDNLLIR DDGCLFHVDF
701: GFILGRDPKP FPPPMKLCKE MVEAMGGTES QYYTRFKSYC CEAYNILRNN SSLILNLFTL MERSSIPDIS TEENATLKVQ EKFRLDLDDE EAIHFFQGLI
801: NDSVSALFPQ MVETIHRWAQ YWR

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.