Factsheet for Bra027152.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014479.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60490.1	Bra014479.1-P	AT3G60630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53049	Canola	cytosol	99.58	87.21
CDY47220	Canola	cytosol	99.44	87.08
KXG24803	Sorghum	cytosol	17.56	83.89
AT1G60490.1	Thale cress	cytosol	92.56	80.96
VIT_01s0127g00430.t01	Wine grape	cytosol	84.69	73.99
KRH62223	Soybean	cytosol	84.55	73.96
Solyc04g015350.2.1	Tomato	cytosol	83.57	73.01
KRH52943	Soybean	cytosol	82.44	72.29
GSMUA_Achr1P21120_001	Banana	cytosol	80.2	64.59
TraesCS5D01G065700.1	Wheat	cytosol, plastid	73.74	63.79
Os05t0180600-02	Rice	cytosol	72.89	63.76
TraesCS5A01G054400.1	Wheat	cytosol, plastid	73.6	63.67
Zm00001d050219_P004	Maize	cytosol, plasma membrane	71.91	61.76
TraesCS5B01G062000.3	Wheat	cytosol, plastid	73.31	61.05
HORVU5Hr1G013230.1	Barley	cytosol, plastid	73.46	58.44
Os08t0307400-02	Rice	cytosol	59.55	51.27
Bra024264.1-P	Field mustard	cytosol	13.76	8.77
Bra018885.1-P	Field mustard	cytosol	20.65	8.55
Bra031936.1-P	Field mustard	cytosol	13.34	8.39
Bra032281.1-P	Field mustard	cytosol	19.8	7.02
Bra018786.1-P	Field mustard	cytosol	19.94	7.0

Protein Annotations

Gene3D:1.10.1070.11	Gene3D:1.25.40.70	MapMan:22.5.1.1	MapMan:27.5.1.1	Gene3D:3.30.1010.10	InterPro:ARM-type_fold
EnsemblPlantsGene:Bra027152	EnsemblPlants:Bra027152.1	EnsemblPlants:Bra027152.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0006810	GO:GO:0006897
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016301	GO:GO:0016303
GO:GO:0016310	GO:GO:0016740	GO:GO:0036092	GO:GO:0046854	GO:GO:0048015	GO:GO:0055046
GO:GO:0072593	InterPro:IPR000403	InterPro:IPR001263	InterPro:IPR002420	InterPro:IPR036940	InterPro:Kinase-like_dom_sf
UniProt:M4EEE0	PFAM:PF00454	PFAM:PF00613	PFAM:PF00792	InterPro:PI3/4_kinase_CS	InterPro:PI3/4_kinase_cat_dom
InterPro:PI3/4_kinase_cat_sf	InterPro:PI3K_C2_dom	InterPro:PI3K_Vps34	PIRSF:PIRSF000587	InterPro:PI_Kinase	InterPro:PInositide-3_kin_accessory_dom
ScanProsite:PS00915	ScanProsite:PS00916	PFscan:PS50290	PFscan:PS51545	PFscan:PS51547	PANTHER:PTHR10048
PANTHER:PTHR10048:SF62	SMART:SM00145	SMART:SM00146	SUPFAM:SSF48371	SUPFAM:SSF49562	SUPFAM:SSF56112
UniParc:UPI00025426DA	SEG:seg	:	:	:	:

Description

AT1G60490 (E=0.0) ATVPS34, VPS34 | ATVPS34; 1-phosphatidylinositol-3-kinase/ binding / inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor

Coordinates

chrA09:+:8820631..8826728

Molecular Weight (calculated)

82018.1 Da

IEP (calculated)

7.121

GRAVY (calculated)

-0.302

Length

712 amino acids

Sequence
(BLAST)

001: MVWDVSCGKG EGLIGGATIL LFNSKMQMKS GKQKLRIWKG KEADGSFPTS TPGKVPRHER GELERLEKLM NKFERGQIQS IDWLDRLLLK SLDKIKEQES
101: SKHGNSYLYL VVDFCSFEHR VVFQESGANL LITSPIGSTN EFVTVWDTEL GKFNPSEHKQ LKLARSLDRG IIDRDLKPSN TERKSIQRVL KYPPTRTLSG
201: DERQLLWKFR FSLMSEKRAL TKFLRCVEWS DVQEAKQAIQ LMYKWETIDV CDALELLSPL FESEEVRAYA VSVLERADDE ELQCYLLQLV QALRFERSDR
301: SRLSQFLVQR ALQNIQLASF FRWYVAVELT DHVYNKRYFS TYDLLEQSMK KLPPDVNGED GNKLWQSLVG QTGLTAQLVS ITREVRNVRG NTQKKIEKLR
401: QLLSGLLSEL TYFEEPIRSP LTPSVLIKGI VPGESTLFKS QLNPLMLAFR TEDEGSCKVI FKKGDDLRQD QLVVQMVWLM DRLLKLENLD LCLTPYKVLA
501: TGHDEGMLEF IPSRSLAQIL SEHRSITSYL QKFHPDEHAP FGITATCLET FIKSCAGYSV ITYILGIGDR HLDNLLLTDD GRLFHVDFAF ILGRDPKPFP
601: PPMKLCKEMV EAMGGAESQY YTRFKSYCCE AYNILRKSSN LILNLFYLMA GSTIPDIASD PEKGILKLQE KFRLDMDDEA CIHFFQDLIN ESVSALFPQM
701: VETIHRWAQY WR

Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)

001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR

Arabidopsis Description

ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.