Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24803 | Sorghum | cytosol | 14.03 | 83.22 |
| VIT_01s0127g00430.t01 | Wine grape | cytosol | 76.36 | 82.82 |
| KRH62223 | Soybean | cytosol | 75.23 | 81.7 |
| Solyc04g015350.2.1 | Tomato | cytosol | 75.23 | 81.6 |
| KRH52943 | Soybean | cytosol | 74.66 | 81.28 |
| Bra027152.1-P | Field mustard | cytosol | 64.59 | 80.2 |
| AT1G60490.1 | Thale cress | cytosol | 71.38 | 77.52 |
| CDY47220 | Canola | cytosol | 71.15 | 77.37 |
| CDY53049 | Canola | cytosol | 70.93 | 77.12 |
| TraesCS5D01G065700.1 | Wheat | cytosol, plastid | 70.36 | 75.58 |
| TraesCS5A01G054400.1 | Wheat | cytosol, plastid | 70.25 | 75.46 |
| Os05t0180600-02 | Rice | cytosol | 69.23 | 75.18 |
| TraesCS5B01G062000.3 | Wheat | cytosol, plastid | 70.25 | 72.63 |
| Zm00001d050219_P004 | Maize | cytosol, plasma membrane | 67.99 | 72.5 |
| HORVU5Hr1G013230.1 | Barley | cytosol, plastid | 70.25 | 69.39 |
| Os08t0307400-02 | Rice | cytosol | 56.22 | 60.1 |
| GSMUA_Achr8P16230_001 | Banana | cytosol, mitochondrion | 10.97 | 8.21 |
| GSMUA_Achr1P22400_001 | Banana | cytosol | 17.31 | 7.76 |
Protein Annotations
Description
Phosphatidylinositol 3-kinase, root isoform [Source:GMGC_GENE;Acc:GSMUA_Achr1G21120_001]
Coordinates
chr1:+:15909586..15930336
Molecular Weight (calculated)
101276.0 Da
IEP (calculated)
7.076
GRAVY (calculated)
-0.221
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGNEFRFFL SCDINLPVTF RIERLEGCLP NPPAEIDSPT GNRNAEIFVE CTLHIDGAPF GLSTKTRLEA SGCPYCWNEL ITLTAKYRDL TSRAQLAFTV
101: WDVSCGNDNG LVGGATVFLF NRKKQLKTGR QKLRLWPGKE ADGAIPTTTP GKVSKHERGE IERLERLVNK YERGQIQQID WLDRLTFKTV DKIKERESIT
201: SENSHLSLVV NFCSFEHRVV FQESGANFFA PSPVSSTNEL VTVWDPEVGR TNPSEHKQLK LARSLTRGII DRDLKPSVNE RRLIQGILKY PPTRALTGDE
301: RQLLWKFRFS LMSEKKALTK FLRCVEWSDV QHVIIPHYRR VGLHFRVNLE FLEAKQAIDL MGKWETIDVT DALELLSPVF ESEEVRAYAV SVLERADDEE
401: LKCYLLQLVQ ALRFERSDKS RLSHFLVQRS LSNIEIASFL RWYVAVELHD PAYAKRYYCT YDMLEDSMMR LEAGVNQDED GFKLWQSLVR QTELTAQLCS
501: IMRDVRNVRG GTQKKIDKLR QLLSGLLSEL TYFDEPIRSP LAPGILITGI VPTESSIFKS ALHPLRLTFR TASGGTCKVI FKKGDDLRQD QLVIQMVSLM
601: DRLLKLENLD LHLTPYKVLA TGQDEGMLEF IPSSSLAQLV KVLQHNIIFL CDNVFSPLQQ SRWLLLRFNH LLPYHMNNGS SPVYISVLLS ILSEHRSIVS
701: YLQRFHPDED GPFGITAQCL ETFIKSCAGY SVITYILGIG DRHLDNLLLR DDGRLFHVDF AFILGRDPKP FPPPMKLCKE MVEAMGGAES QYYTRFKSYC
801: CEAYNILRKS SNLILNLFHL MAGSNIPDIA SDPEKGILKL QEKFRLDLDD EDAIHFFQDL ITDSVSALFP QMVETIHRWA QYWR
101: WDVSCGNDNG LVGGATVFLF NRKKQLKTGR QKLRLWPGKE ADGAIPTTTP GKVSKHERGE IERLERLVNK YERGQIQQID WLDRLTFKTV DKIKERESIT
201: SENSHLSLVV NFCSFEHRVV FQESGANFFA PSPVSSTNEL VTVWDPEVGR TNPSEHKQLK LARSLTRGII DRDLKPSVNE RRLIQGILKY PPTRALTGDE
301: RQLLWKFRFS LMSEKKALTK FLRCVEWSDV QHVIIPHYRR VGLHFRVNLE FLEAKQAIDL MGKWETIDVT DALELLSPVF ESEEVRAYAV SVLERADDEE
401: LKCYLLQLVQ ALRFERSDKS RLSHFLVQRS LSNIEIASFL RWYVAVELHD PAYAKRYYCT YDMLEDSMMR LEAGVNQDED GFKLWQSLVR QTELTAQLCS
501: IMRDVRNVRG GTQKKIDKLR QLLSGLLSEL TYFDEPIRSP LAPGILITGI VPTESSIFKS ALHPLRLTFR TASGGTCKVI FKKGDDLRQD QLVIQMVSLM
601: DRLLKLENLD LHLTPYKVLA TGQDEGMLEF IPSSSLAQLV KVLQHNIIFL CDNVFSPLQQ SRWLLLRFNH LLPYHMNNGS SPVYISVLLS ILSEHRSIVS
701: YLQRFHPDED GPFGITAQCL ETFIKSCAGY SVITYILGIG DRHLDNLLLR DDGRLFHVDF AFILGRDPKP FPPPMKLCKE MVEAMGGAES QYYTRFKSYC
801: CEAYNILRKS SNLILNLFHL MAGSNIPDIA SDPEKGILKL QEKFRLDLDD EDAIHFFQDL ITDSVSALFP QMVETIHRWA QYWR
001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR
Arabidopsis Description
ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.