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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P36740_001 Banana cytosol 65.34 72.33
VIT_02s0154g00400.t01 Wine grape cytosol 45.08 46.48
Bra014479.1-P Field mustard cytosol, peroxisome, plastid 15.34 44.51
Solyc08g078800.1.1 Tomato plastid 39.2 43.67
GSMUA_Achr11P... Banana cytosol 47.92 42.52
GSMUA_Achr8P11160_001 Banana cytosol 50.0 39.58
GSMUA_Achr5P20860_001 Banana cytosol 41.48 39.53
Bra003311.1-P Field mustard nucleus 34.85 36.36
GSMUA_Achr11P... Banana cytosol 47.35 36.13
AT4G00150.1 Thale cress cytosol, plastid 36.93 34.95
Bra037319.1-P Field mustard cytosol, plastid 35.61 33.45
CDY63061 Canola cytosol, plastid 35.61 33.45
CDY63062 Canola cytosol, plastid 35.61 33.45
CDX95633 Canola cytosol 34.66 33.03
VIT_15s0048g00270.t01 Wine grape extracellular, golgi, mitochondrion, nucleus 48.3 32.9
CDX83398 Canola cytosol 35.04 31.36
CDY56248 Canola cytosol 35.42 31.11
CDX89065 Canola nucleus 32.39 31.09
CDY67934 Canola cytosol 35.04 30.94
PGSC0003DMT400012104 Potato plastid 40.72 30.71
Bra000375.1-P Field mustard cytosol 35.23 30.64
Solyc01g090950.2.1 Tomato cytosol 44.51 30.56
PGSC0003DMT400066799 Potato cytosol, nucleus, vacuole 44.32 30.47
CDY48367 Canola cytosol 31.63 29.61
AT2G45160.1 Thale cress cytosol 35.61 29.38
KRH75351 Soybean cytosol 40.91 29.03
KRG88927 Soybean cytosol 40.91 28.99
AT3G60630.1 Thale cress cytosol 34.09 28.89
KRH76167 Soybean cytosol 39.39 28.22
KRH65380 Soybean cytosol 37.88 27.32
GSMUA_Achr3P29970_001 Banana cytosol 27.46 27.31
GSMUA_Achr4P07190_001 Banana plastid 25.76 26.05
GSMUA_Achr4P03460_001 Banana cytosol, plastid 25.57 25.28
GSMUA_Achr1P26740_001 Banana cytosol 21.02 20.98
Protein Annotations
EnsemblPlants:GSMUA_Achr1P05940_001EnsemblPlants:GSMUA_Achr1T05940_001EnsemblPlantsGene:GSMUA_Achr1G05940_001GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRAS
PANTHER:PTHR31636PANTHER:PTHR31636:SF52PFAM:PF03514PFscan:PS50985SEG:segUniParc:UPI000296877A
UniProt:M0RXF2MapMan:15.5.12::::
Description
Putative Scarecrow-like protein 6 [Source:GMGC_GENE;Acc:GSMUA_Achr1G05940_001]
Coordinates
chr1:-:4835472..4837298
Molecular Weight (calculated)
58012.9 Da
IEP (calculated)
8.429
GRAVY (calculated)
-0.017
Length
528 amino acids
Sequence
(BLAST)
001: MASSVLSAGV LGSKGATFGC TPSLAPRPAN SLPLSLPPLP PGVISQESTE EKPLFGSSLF FAHQQQAQPP QRSSFFLPLN HFAGYHEGQP LEHLAPPPRK
101: RPAIDPLPSS HVPDLFLRRN QPQQLGLPQQ FNTAAFQLQP APGKPKLANG DEASVAARQQ RELVDQLFKA AEVLEAGNTV SARGILARLN HQFPSPVGKP
201: FLRSAFYFKE ALHLLASHSP HPHPPPSLPI STPLDVMLKL GAYKTFSDVS PIVQFASFTC IQPLLEALDG ASRIHIIDFD IGVGMQWSAF MQELAQRWSS
301: SMATAPFLKI TAFASAYSHH SLELNLIHQN LSHFASSLNI PFEFNVLSLD PFDPTVLFRM CSAMDEAVAV NLPIGSAIRP PIPTLLRFVK QLSPKIVVSV
401: DYGCDRIDLP FAHHILHAFQ SCTVLLDSID AAGANQDAAN KIERFLVRPR IESAVLGRHH LSDKTLPWRT LFASAGFMHV QFSNFTETQA ECLLKRVLVR
501: GFHVEKRQSS LSLCWQRGEL VSVSAWKC
Best Arabidopsis Sequence Match ( AT4G00150.1 )
(BLAST)
001: MPLPFEEFQG KGISCFSSFS SSFPQPPSSP LLSHRKARGG EEEEEEVPAA EPTSVLDSLI SPTSSSTVSS SHGGNSAVGG GGDATTDEQC GAIGLGDWEE
101: QVPHDHEQSI LGLIMGDSTD PSLELNSILQ TSPTFHDSDY SSPGFGVVDT GFGLDHHSVP PSHVSGLLIN QSQTHYTQNP AAIFYGHHHH TPPPAKRLNP
201: GPVGITEQLV KAAEVIESDT CLAQGILARL NQQLSSPVGK PLERAAFYFK EALNNLLHNV SQTLNPYSLI FKIAAYKSFS EISPVLQFAN FTSNQALLES
301: FHGFHRLHII DFDIGYGGQW ASLMQELVLR DNAAPLSLKI TVFASPANHD QLELGFTQDN LKHFASEINI SLDIQVLSLD LLGSISWPNS SEKEAVAVNI
401: SAASFSHLPL VLRFVKHLSP TIIVCSDRGC ERTDLPFSQQ LAHSLHSHTA LFESLDAVNA NLDAMQKIER FLIQPEIEKL VLDRSRPIER PMMTWQAMFL
501: QMGFSPVTHS NFTESQAECL VQRTPVRGFH VEKKHNSLLL CWQRTELVGV SAWRCRSS
Arabidopsis Description
SCL6Scarecrow-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O81316]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.