Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56248 | Canola | cytosol | 96.15 | 95.67 |
| CDX95633 | Canola | cytosol | 75.75 | 81.77 |
| AT2G45160.1 | Thale cress | cytosol | 85.45 | 79.84 |
| CDX83398 | Canola | cytosol | 78.76 | 79.83 |
| CDX89065 | Canola | nucleus | 55.52 | 60.36 |
| CDY48367 | Canola | cytosol | 55.52 | 58.87 |
| CDY63062 | Canola | cytosol, plastid | 40.8 | 43.42 |
| CDY63061 | Canola | cytosol, plastid | 40.8 | 43.42 |
| Zm00001d022034_P001 | Maize | cytosol | 20.57 | 40.2 |
| VIT_15s0048g00270.t01 | Wine grape | extracellular, golgi, mitochondrion, nucleus | 48.33 | 37.29 |
| GSMUA_Achr6P36740_001 | Banana | cytosol | 28.93 | 36.27 |
| Os10t0551200-01 | Rice | cytosol | 24.08 | 36.18 |
| KRH76167 | Soybean | cytosol | 44.31 | 35.96 |
| KRG88927 | Soybean | cytosol | 44.15 | 35.44 |
| KRH65380 | Soybean | cytosol | 43.14 | 35.25 |
| KRH75351 | Soybean | cytosol | 43.81 | 35.22 |
| GSMUA_Achr1P05940_001 | Banana | plastid | 30.94 | 35.04 |
| PGSC0003DMT400066799 | Potato | cytosol, nucleus, vacuole | 44.82 | 34.9 |
| Solyc01g090950.2.1 | Tomato | cytosol | 44.65 | 34.72 |
| GSMUA_Achr5P20860_001 | Banana | cytosol | 31.1 | 33.57 |
| GSMUA_Achr11P... | Banana | cytosol | 32.78 | 32.94 |
| Zm00001d045589_P001 | Maize | cytosol | 27.26 | 32.6 |
| Zm00001d047957_P001 | Maize | cytosol | 7.02 | 32.56 |
| Os06t0105350-00 | Rice | plastid | 26.59 | 32.52 |
| Zm00001d035873_P001 | Maize | cytosol, plastid | 15.22 | 31.82 |
| TraesCS7D01G011400.1 | Wheat | plastid | 28.26 | 31.77 |
| EER87695 | Sorghum | cytosol, plastid | 27.09 | 31.58 |
| TraesCS4A01G482000.1 | Wheat | plastid | 28.6 | 31.49 |
| Zm00001d027292_P001 | Maize | peroxisome | 24.92 | 30.98 |
| CDX72597 | Canola | cytosol | 23.75 | 30.8 |
| GSMUA_Achr8P11160_001 | Banana | cytosol | 33.44 | 29.98 |
| CDX75590 | Canola | cytosol | 24.25 | 29.77 |
| Os03t0103400-01 | Rice | cytosol | 23.58 | 29.75 |
| TraesCS1D01G212800.1 | Wheat | cytosol | 30.6 | 29.47 |
| TraesCS1A01G209400.1 | Wheat | mitochondrion, plastid | 30.77 | 29.44 |
| TraesCS7A01G014200.1 | Wheat | plastid | 28.6 | 29.43 |
| TraesCS1B01G223400.1 | Wheat | cytosol, plastid | 30.6 | 29.33 |
| TraesCS6B01G277400.1 | Wheat | mitochondrion | 34.28 | 29.29 |
| TraesCS6D01G229400.1 | Wheat | mitochondrion | 34.62 | 29.28 |
| Os02t0662700-01 | Rice | cytosol | 34.62 | 29.2 |
| HORVU1Hr1G053510.1 | Barley | plastid | 30.27 | 29.19 |
| TraesCS6A01G247200.1 | Wheat | mitochondrion | 34.28 | 29.12 |
| CDX69238 | Canola | cytosol | 23.75 | 29.04 |
| EES11245 | Sorghum | cytosol, nucleus, peroxisome | 34.95 | 29.03 |
| Zm00001d002718_P001 | Maize | cytosol | 34.95 | 28.99 |
| HORVU6Hr1G063650.1 | Barley | cytosol, mitochondrion, nucleus, plasma membrane | 33.95 | 28.88 |
| Zm00001d051387_P001 | Maize | cytosol | 33.78 | 28.53 |
| CDY43895 | Canola | cytosol | 23.41 | 28.51 |
| Zm00001d026158_P001 | Maize | cytosol | 34.11 | 28.41 |
| Os04t0555000-01 | Rice | cytosol | 33.78 | 28.41 |
| CDY13032 | Canola | cytosol | 23.41 | 28.4 |
| TraesCS5A01G535000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 30.1 | 28.26 |
| Os02t0663100-01 | Rice | cytosol | 33.78 | 28.25 |
| EES05768 | Sorghum | cytosol | 33.78 | 28.21 |
| EER91968 | Sorghum | cytosol, mitochondrion | 30.1 | 28.12 |
| TraesCS4B01G367300.1 | Wheat | cytosol | 30.1 | 28.04 |
| TraesCS4D01G360200.1 | Wheat | cytosol | 29.93 | 27.88 |
| HORVU4Hr1G087700.2 | Barley | cytosol, mitochondrion, peroxisome, plastid | 29.43 | 27.59 |
| GSMUA_Achr11P... | Banana | cytosol | 31.77 | 27.46 |
| Zm00001d029855_P001 | Maize | mitochondrion | 29.6 | 27.44 |
| Zm00001d017513_P001 | Maize | cytosol, mitochondrion, nucleus | 31.44 | 26.63 |
| Zm00001d018956_P001 | Maize | plastid | 6.35 | 26.57 |
| Zm00001d027569_P001 | Maize | plastid | 13.55 | 25.88 |
| Zm00001d022162_P001 | Maize | cytosol | 6.52 | 23.64 |
| Zm00001d042852_P001 | Maize | cytosol | 9.36 | 22.76 |
| OQU85680 | Sorghum | mitochondrion | 24.41 | 22.57 |
| CDY45672 | Canola | cytosol | 17.39 | 21.27 |
| Zm00001d002023_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 12.21 | 20.62 |
| CDY17336 | Canola | cytosol | 17.06 | 20.44 |
| Zm00001d031615_P001 | Maize | cytosol | 9.03 | 19.85 |
Protein Annotations
| EnsemblPlants:CDY67934 | EnsemblPlantsGene:GSBRNA2T00067696001 | GO:A0A078JM97 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF11 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY67934 | ProteinID:CDY67934.1 |
| SEG:seg | UniParc:UPI0004EDBF55 | UniProt:A0A078JM97 | MapMan:15.5.12 | : | : |
Description
BnaCnng57010DBnaCnng57010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JM97]
Coordinates
chrLK036669:-:3839..5672
Molecular Weight (calculated)
66083.8 Da
IEP (calculated)
5.323
GRAVY (calculated)
-0.269
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSFERFQG EGVFGVVSSL YSDPQKIWFN QDKTGAEQDL GYVVGGVLPE PTSVLDALRS PSPLASHSST TTTMTLSSSH GGGTVTATAT AVDDKCSQIG
101: LDDLDGGQEQ SILRLIMDPG SGFGVFDPGF GFGSGSVPVN PLLSSSFPYQ EELTFSNPPS SPPAKRFNSG SHQPVFPFPD PGHDPFLVRR QQQFQFPFQF
201: HQQQLPSSSS SLAPVPPPGT AGDDQTVIIE QLFNAAELIG NNNNNGDHTA LAQGILARLN HHLSYSNNNN NKNPPFQRAA SHITEALLSL INNASPPLIS
301: PENMILRIAA YRTFSETSPF LQFVNFTANQ SILESCNDEL GFDRIHIIDF DVGYGGQWSS LMQELASRRR NRASSLKITV FAPPPSTVSD EFELRFTEEN
401: LRSFAGEVKI PFEIELLSLE LLLNPAYWPV SLRSLEKEAV AVNLPVNSVV SGYLPFILRF LKQISPNVVV CSDRGCDRND APFPNAVIHA LQYHTTLLES
501: LDANQSQEDE SVERFWVQPS IEKLLMKRHR WIERSQPWRS LFTQCGFSPA SLSQTAEAQA ECLLQRSPVR GFHVEKRHGS LVMCWQRKEL VTVSAWKC
101: LDDLDGGQEQ SILRLIMDPG SGFGVFDPGF GFGSGSVPVN PLLSSSFPYQ EELTFSNPPS SPPAKRFNSG SHQPVFPFPD PGHDPFLVRR QQQFQFPFQF
201: HQQQLPSSSS SLAPVPPPGT AGDDQTVIIE QLFNAAELIG NNNNNGDHTA LAQGILARLN HHLSYSNNNN NKNPPFQRAA SHITEALLSL INNASPPLIS
301: PENMILRIAA YRTFSETSPF LQFVNFTANQ SILESCNDEL GFDRIHIIDF DVGYGGQWSS LMQELASRRR NRASSLKITV FAPPPSTVSD EFELRFTEEN
401: LRSFAGEVKI PFEIELLSLE LLLNPAYWPV SLRSLEKEAV AVNLPVNSVV SGYLPFILRF LKQISPNVVV CSDRGCDRND APFPNAVIHA LQYHTTLLES
501: LDANQSQEDE SVERFWVQPS IEKLLMKRHR WIERSQPWRS LFTQCGFSPA SLSQTAEAQA ECLLQRSPVR GFHVEKRHGS LVMCWQRKEL VTVSAWKC
001: MPLSFERFQG EGVFGLSSSS FYSDSQKIWS NQDKTEAKQE DLGYVVGGFL PEPTSVLDAL RSPSPLASYS STTTTLSSSH GGGGTTVTNT TVTAGDDNNN
101: NKCSQMGLDD LDGVLSASSP GQEQSILRLI MDPGSAFGVF DPGFGFGSGS GPVSAPVSDN SNLLCNFPFQ EITNPAEALI NPSNHCLFYN PPLSPPAKRF
201: NSGSLHQPVF PLSDPDPGHD PVRRQHQFQF PFYHNNQQQQ FPSSSSSTAV AMVPVPSPGM AGDDQSVIIE QLFNAAELIG TTGNNNGDHT VLAQGILARL
301: NHHLNTSSNH KSPFQRAASH IAEALLSLIH NESSPPLITP ENLILRIAAY RSFSETSPFL QFVNFTANQS ILESCNESGF DRIHIIDFDV GYGGQWSSLM
401: QELASGVGGR RRNRASSLKL TVFAPPPSTV SDEFELRFTE ENLKTFAGEV KIPFEIELLS VELLLNPAYW PLSLRSSEKE AIAVNLPVNS VASGYLPLIL
501: RFLKQLSPNI VVCSDRGCDR NDAPFPNAVI HSLQYHTSLL ESLDANQNQD DSSIERFWVQ PSIEKLLMKR HRWIERSPPW RILFTQCGFS PASLSQMAEA
601: QAECLLQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
101: NKCSQMGLDD LDGVLSASSP GQEQSILRLI MDPGSAFGVF DPGFGFGSGS GPVSAPVSDN SNLLCNFPFQ EITNPAEALI NPSNHCLFYN PPLSPPAKRF
201: NSGSLHQPVF PLSDPDPGHD PVRRQHQFQF PFYHNNQQQQ FPSSSSSTAV AMVPVPSPGM AGDDQSVIIE QLFNAAELIG TTGNNNGDHT VLAQGILARL
301: NHHLNTSSNH KSPFQRAASH IAEALLSLIH NESSPPLITP ENLILRIAAY RSFSETSPFL QFVNFTANQS ILESCNESGF DRIHIIDFDV GYGGQWSSLM
401: QELASGVGGR RRNRASSLKL TVFAPPPSTV SDEFELRFTE ENLKTFAGEV KIPFEIELLS VELLLNPAYW PLSLRSSEKE AIAVNLPVNS VASGYLPLIL
501: RFLKQLSPNI VVCSDRGCDR NDAPFPNAVI HSLQYHTSLL ESLDANQNQD DSSIERFWVQ PSIEKLLMKR HRWIERSPPW RILFTQCGFS PASLSQMAEA
601: QAECLLQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
Arabidopsis Description
SCL27Scarecrow-like protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJM8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.