Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95633 | Canola | cytosol | 91.02 | 96.93 |
| Bra000375.1-P | Field mustard | cytosol | 97.29 | 94.56 |
| CDY67934 | Canola | cytosol | 79.83 | 78.76 |
| CDY56248 | Canola | cytosol | 78.98 | 77.54 |
| AT2G45160.1 | Thale cress | cytosol | 81.53 | 75.16 |
| CDX89065 | Canola | nucleus | 56.95 | 61.09 |
| CDY48367 | Canola | cytosol | 56.95 | 59.57 |
| CDY63062 | Canola | cytosol, plastid | 39.83 | 41.81 |
| CDY63061 | Canola | cytosol, plastid | 39.83 | 41.81 |
| Zm00001d022034_P001 | Maize | cytosol | 20.51 | 39.54 |
| Os10t0551200-01 | Rice | cytosol | 24.92 | 36.93 |
| VIT_15s0048g00270.t01 | Wine grape | extracellular, golgi, mitochondrion, nucleus | 47.97 | 36.52 |
| Zm00001d047957_P001 | Maize | cytosol | 7.8 | 35.66 |
| KRH76167 | Soybean | cytosol | 44.41 | 35.55 |
| GSMUA_Achr6P36740_001 | Banana | cytosol | 28.64 | 35.43 |
| KRG88927 | Soybean | cytosol | 44.41 | 35.17 |
| PGSC0003DMT400066799 | Potato | cytosol, nucleus, vacuole | 45.76 | 35.16 |
| Solyc01g090950.2.1 | Tomato | cytosol | 45.76 | 35.11 |
| GSMUA_Achr1P05940_001 | Banana | plastid | 31.36 | 35.04 |
| KRH65380 | Soybean | cytosol | 43.22 | 34.84 |
| KRH75351 | Soybean | cytosol | 43.39 | 34.41 |
| Zm00001d045589_P001 | Maize | cytosol | 28.81 | 34.0 |
| Os06t0105350-00 | Rice | plastid | 28.14 | 33.95 |
| EER87695 | Sorghum | cytosol, plastid | 28.47 | 32.75 |
| TraesCS7D01G011400.1 | Wheat | plastid | 29.32 | 32.52 |
| GSMUA_Achr5P20860_001 | Banana | cytosol | 30.17 | 32.13 |
| GSMUA_Achr11P... | Banana | cytosol | 32.2 | 31.93 |
| Zm00001d035873_P001 | Maize | cytosol, plastid | 15.42 | 31.82 |
| TraesCS4A01G482000.1 | Wheat | plastid | 28.98 | 31.49 |
| Zm00001d027292_P001 | Maize | peroxisome | 24.58 | 30.15 |
| HORVU1Hr1G053510.1 | Barley | plastid | 31.36 | 29.84 |
| CDX72597 | Canola | cytosol | 23.22 | 29.72 |
| TraesCS1D01G212800.1 | Wheat | cytosol | 31.19 | 29.63 |
| TraesCS7A01G014200.1 | Wheat | plastid | 29.15 | 29.6 |
| TraesCS1A01G209400.1 | Wheat | mitochondrion, plastid | 31.36 | 29.6 |
| Os03t0103400-01 | Rice | cytosol | 23.73 | 29.54 |
| TraesCS1B01G223400.1 | Wheat | cytosol, plastid | 31.19 | 29.49 |
| CDX75590 | Canola | cytosol | 23.9 | 28.95 |
| GSMUA_Achr8P11160_001 | Banana | cytosol | 32.71 | 28.94 |
| Zm00001d018956_P001 | Maize | plastid | 6.95 | 28.67 |
| CDY43895 | Canola | cytosol | 23.73 | 28.51 |
| CDX69238 | Canola | cytosol | 23.56 | 28.43 |
| CDY13032 | Canola | cytosol | 23.73 | 28.4 |
| EER91968 | Sorghum | cytosol, mitochondrion | 30.68 | 28.28 |
| TraesCS6B01G277400.1 | Wheat | mitochondrion | 33.39 | 28.14 |
| Os04t0555000-01 | Rice | cytosol | 33.9 | 28.13 |
| TraesCS6A01G247200.1 | Wheat | mitochondrion | 33.56 | 28.12 |
| HORVU6Hr1G063650.1 | Barley | cytosol, mitochondrion, nucleus, plasma membrane | 33.39 | 28.02 |
| Os02t0662700-01 | Rice | cytosol | 33.56 | 27.93 |
| EES11245 | Sorghum | cytosol, nucleus, peroxisome | 34.07 | 27.92 |
| Zm00001d002718_P001 | Maize | cytosol | 34.07 | 27.88 |
| TraesCS6D01G229400.1 | Wheat | mitochondrion | 33.39 | 27.86 |
| Zm00001d051387_P001 | Maize | cytosol | 33.39 | 27.82 |
| TraesCS5A01G535000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 29.83 | 27.63 |
| GSMUA_Achr11P... | Banana | cytosol | 32.37 | 27.6 |
| TraesCS4B01G367300.1 | Wheat | cytosol | 30.0 | 27.57 |
| Zm00001d029855_P001 | Maize | mitochondrion | 30.0 | 27.44 |
| Zm00001d026158_P001 | Maize | cytosol | 33.39 | 27.44 |
| EES05768 | Sorghum | cytosol | 33.22 | 27.37 |
| HORVU4Hr1G087700.2 | Barley | cytosol, mitochondrion, peroxisome, plastid | 29.49 | 27.27 |
| TraesCS4D01G360200.1 | Wheat | cytosol | 29.66 | 27.26 |
| Os02t0663100-01 | Rice | cytosol | 32.71 | 26.99 |
| Zm00001d017513_P001 | Maize | cytosol, mitochondrion, nucleus | 31.19 | 26.06 |
| Zm00001d022162_P001 | Maize | cytosol | 7.29 | 26.06 |
| Zm00001d027569_P001 | Maize | plastid | 13.73 | 25.88 |
| Zm00001d042852_P001 | Maize | cytosol | 9.83 | 23.58 |
| OQU85680 | Sorghum | mitochondrion | 24.41 | 22.26 |
| Zm00001d002023_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 12.54 | 20.9 |
| Zm00001d031615_P001 | Maize | cytosol | 9.49 | 20.59 |
| CDY45672 | Canola | cytosol | 16.1 | 19.43 |
| CDY17336 | Canola | cytosol | 15.93 | 18.84 |
Protein Annotations
| EnsemblPlants:CDX83398 | EnsemblPlantsGene:GSBRNA2T00138967001 | GO:A0A078D813 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF11 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDX83398 | ProteinID:CDX83398.1 | SEG:seg |
| UniParc:UPI0004EDF13A | MapMan:15.5.12 | : | : | : | : |
Description
BnaA03g21080D
Coordinates
chrLK031832:+:1390174..1392240
Molecular Weight (calculated)
65092.7 Da
IEP (calculated)
5.563
GRAVY (calculated)
-0.232
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSFERFQG EGVFSVSSFY SDSHKTRFNQ DKTGIEEERE DLGYVFRGGL QEPTSVLDAL RSPSPLASHS STTTNTTLSS SHGGGAVTVT ATTTTAGDDK
101: CSQISLDDLD GVISPDQEQS ILRLIMDPGS GFGVLDPCFG FGSGSAPVSD GSNPLLPCGF PFNEQTHQIP NQESLFSNPP SSPPTKRFNS GSHQPVFPFS
201: DPVPVQQYQF PVQFHPQQIS PSSSSSPAAA LSVIIEQLFN AAELIATTGD HTILAQGILA RLNHHLSSSY NNKAPFHRAA SHISEALLSL VHDAAPPLLT
301: PENLILRIAA YRTFSETSPF LQFVNFTANQ SILELGFERI HVIDFDVGYG GQWSSLMQEL ARKRGSCLKV TVFAPPPSSV SDEFELRFTE ENLRSFAGEL
401: KVPFEMELLS LELLLNPAYW PLSLRSSEKE AVAVNLPVSS VDSGYLPLIL RFLKQISPNV VVCSDRGCDR NDAPFPNAVI HALQYHTTLL ESLDANQSQE
501: DSSVERFWVR PSIEKLLVKR HRWIERSPPW RSLFTQCGFT PASLSQTAET QAECLMQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
101: CSQISLDDLD GVISPDQEQS ILRLIMDPGS GFGVLDPCFG FGSGSAPVSD GSNPLLPCGF PFNEQTHQIP NQESLFSNPP SSPPTKRFNS GSHQPVFPFS
201: DPVPVQQYQF PVQFHPQQIS PSSSSSPAAA LSVIIEQLFN AAELIATTGD HTILAQGILA RLNHHLSSSY NNKAPFHRAA SHISEALLSL VHDAAPPLLT
301: PENLILRIAA YRTFSETSPF LQFVNFTANQ SILELGFERI HVIDFDVGYG GQWSSLMQEL ARKRGSCLKV TVFAPPPSSV SDEFELRFTE ENLRSFAGEL
401: KVPFEMELLS LELLLNPAYW PLSLRSSEKE AVAVNLPVSS VDSGYLPLIL RFLKQISPNV VVCSDRGCDR NDAPFPNAVI HALQYHTTLL ESLDANQSQE
501: DSSVERFWVR PSIEKLLVKR HRWIERSPPW RSLFTQCGFT PASLSQTAET QAECLMQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
001: MPLSFERFQG EGVFGLSSSS FYSDSQKIWS NQDKTEAKQE DLGYVVGGFL PEPTSVLDAL RSPSPLASYS STTTTLSSSH GGGGTTVTNT TVTAGDDNNN
101: NKCSQMGLDD LDGVLSASSP GQEQSILRLI MDPGSAFGVF DPGFGFGSGS GPVSAPVSDN SNLLCNFPFQ EITNPAEALI NPSNHCLFYN PPLSPPAKRF
201: NSGSLHQPVF PLSDPDPGHD PVRRQHQFQF PFYHNNQQQQ FPSSSSSTAV AMVPVPSPGM AGDDQSVIIE QLFNAAELIG TTGNNNGDHT VLAQGILARL
301: NHHLNTSSNH KSPFQRAASH IAEALLSLIH NESSPPLITP ENLILRIAAY RSFSETSPFL QFVNFTANQS ILESCNESGF DRIHIIDFDV GYGGQWSSLM
401: QELASGVGGR RRNRASSLKL TVFAPPPSTV SDEFELRFTE ENLKTFAGEV KIPFEIELLS VELLLNPAYW PLSLRSSEKE AIAVNLPVNS VASGYLPLIL
501: RFLKQLSPNI VVCSDRGCDR NDAPFPNAVI HSLQYHTSLL ESLDANQNQD DSSIERFWVQ PSIEKLLMKR HRWIERSPPW RILFTQCGFS PASLSQMAEA
601: QAECLLQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
101: NKCSQMGLDD LDGVLSASSP GQEQSILRLI MDPGSAFGVF DPGFGFGSGS GPVSAPVSDN SNLLCNFPFQ EITNPAEALI NPSNHCLFYN PPLSPPAKRF
201: NSGSLHQPVF PLSDPDPGHD PVRRQHQFQF PFYHNNQQQQ FPSSSSSTAV AMVPVPSPGM AGDDQSVIIE QLFNAAELIG TTGNNNGDHT VLAQGILARL
301: NHHLNTSSNH KSPFQRAASH IAEALLSLIH NESSPPLITP ENLILRIAAY RSFSETSPFL QFVNFTANQS ILESCNESGF DRIHIIDFDV GYGGQWSSLM
401: QELASGVGGR RRNRASSLKL TVFAPPPSTV SDEFELRFTE ENLKTFAGEV KIPFEIELLS VELLLNPAYW PLSLRSSEKE AIAVNLPVNS VASGYLPLIL
501: RFLKQLSPNI VVCSDRGCDR NDAPFPNAVI HSLQYHTSLL ESLDANQNQD DSSIERFWVQ PSIEKLLMKR HRWIERSPPW RILFTQCGFS PASLSQMAEA
601: QAECLLQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
Arabidopsis Description
SCL27Scarecrow-like protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJM8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.