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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022034_P001 Maize cytosol 35.02 81.37
EES11245 Sorghum cytosol, nucleus, peroxisome 79.47 78.47
Zm00001d002718_P001 Maize cytosol 79.18 78.09
Zm00001d026158_P001 Maize cytosol 76.79 76.04
Os02t0663100-01 Rice cytosol 70.46 70.07
Os02t0662700-01 Rice cytosol 68.5 68.69
Os10t0551200-01 Rice cytosol 28.97 51.76
GSMUA_Achr11P... Banana cytosol 41.49 49.58
GSMUA_Achr5P20860_001 Banana cytosol 36.01 46.21
Os03t0103400-01 Rice cytosol 29.96 44.94
Os06t0105350-00 Rice plastid 30.52 44.38
GSMUA_Achr8P11160_001 Banana cytosol 40.51 43.18
VIT_02s0154g00400.t01 Wine grape cytosol 29.82 41.41
GSMUA_Achr11P... Banana cytosol 40.23 41.33
AT4G00150.1 Thale cress cytosol, plastid 30.38 38.71
Solyc08g078800.1.1 Tomato plastid 25.18 37.76
Bra014479.1-P Field mustard cytosol, peroxisome, plastid 9.28 36.26
CDY63062 Canola cytosol, plastid 28.55 36.12
CDY63061 Canola cytosol, plastid 28.55 36.12
Bra037319.1-P Field mustard cytosol, plastid 28.55 36.12
VIT_15s0048g00270.t01 Wine grape extracellular, golgi, mitochondrion, nucleus 38.82 35.61
CDX95633 Canola cytosol 27.0 34.66
Bra003311.1-P Field mustard nucleus 24.19 33.99
CDX83398 Canola cytosol 28.13 33.9
CDY67934 Canola cytosol 28.41 33.78
KRG88927 Soybean cytosol 35.16 33.56
Solyc01g090950.2.1 Tomato cytosol 36.01 33.29
KRH75351 Soybean cytosol 34.74 33.2
CDY56248 Canola cytosol 27.99 33.11
PGSC0003DMT400066799 Potato cytosol, nucleus, vacuole 35.72 33.07
Bra000375.1-P Field mustard cytosol 28.13 32.95
AT2G45160.1 Thale cress cytosol 29.54 32.81
CDY48367 Canola cytosol 25.74 32.45
CDX89065 Canola nucleus 24.89 32.18
PGSC0003DMT400012104 Potato plastid 31.5 32.0
KRH76167 Soybean cytosol 32.35 31.21
AT3G60630.1 Thale cress cytosol 27.0 30.82
KRH65380 Soybean cytosol 31.36 30.46
Os11t0160550-00 Rice cytosol 15.89 24.51
Os03t0263300-01 Rice cytosol 15.47 19.13
Os12t0162700-00 Rice nucleus 7.88 15.18
Os11t0160600-01 Rice cytosol 0.28 4.0
Protein Annotations
MapMan:15.5.12EntrezGene:4336617ProteinID:BAF15428.1ProteinID:BAS90418.1ProteinID:CAD41636.2ProteinID:CAE01700.2
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0030154GO:GO:0043565
InterPro:IPR005202EnsemblPlantsGene:Os04g0555000EnsemblPlants:Os04t0555000-01PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636
PANTHER:PTHR31636:SF64UniProt:Q7XT28InterPro:TF_GRASUniParc:UPI00001B0D47RefSeq:XP_015637143.1SEG:seg
Description
hairy meristem 3GRAS transcription factor domain containing protein. (Os04t0555000-01)
Coordinates
chr4:+:27764668..27767324
Molecular Weight (calculated)
74011.9 Da
IEP (calculated)
5.849
GRAVY (calculated)
0.004
Length
711 amino acids
Sequence
(BLAST)
001: MRAAPFSADG NGAAELAGSI AALLWPEDKG GGGGGGGGSL LVEPRSVLDC RGSPSPPNST STLSSSHGSG AADSISTGVA AVSESSAAAA EATRWAAPGE
101: HGGGGGGELP PIPGALDVGF VAEESWDAML GDAAAAAGQE QTFLNWIMAA PGDMEPQAPG LSQQQLLANA AGFGFPLQHH PGGVSSPAAL ASDLSSSGGR
201: SLTSSSGSNS KATSAFGLLS PEAALQPPPA TTAPFHNGAD MKPPLLGLPS PTLLLNQHQP TPASTLFMPF PSFSDHQQQP LLQPPPKRHH SVPDNLFLLH
301: NQPQPPPPAP AQCLPFPTLH SAVPFQLQPS MQHPRNAMKS TAAAAAAQQQ HLLDELAAAA KATEVGNSIG AREILARLNQ QLPPIGKPFL RSASYLKDAL
401: LLALADGHHA ATRLTSPLDV ALKLTAYKSF SDLSPVLQFA NFTVTQALLD EIASTTASCI RVIDFDLGVG GQWASFLQEL AHRCGSGGVS LPMLKLTAFV
501: SAASHHPLEL HLTQDNLSQF AADLGIPFEF NAINLDAFDP MELIAPTADE VVAVSLPVGC SARTPLPAML QLVKQLAPKI VVAIDYGSDR SDLPFSQHFL
601: NCLQSCLCLL ESLDAAGTDA DAVSKIERFL IQPRVEDAVL GRRRADKAIA WRTVLTSAGF APQPLSNLAE AQADCLLKRV QVRGFHVEKR GAGLALYWQR
701: GELVSVSAWR C
Best Arabidopsis Sequence Match ( AT4G00150.1 )
(BLAST)
001: MPLPFEEFQG KGISCFSSFS SSFPQPPSSP LLSHRKARGG EEEEEEVPAA EPTSVLDSLI SPTSSSTVSS SHGGNSAVGG GGDATTDEQC GAIGLGDWEE
101: QVPHDHEQSI LGLIMGDSTD PSLELNSILQ TSPTFHDSDY SSPGFGVVDT GFGLDHHSVP PSHVSGLLIN QSQTHYTQNP AAIFYGHHHH TPPPAKRLNP
201: GPVGITEQLV KAAEVIESDT CLAQGILARL NQQLSSPVGK PLERAAFYFK EALNNLLHNV SQTLNPYSLI FKIAAYKSFS EISPVLQFAN FTSNQALLES
301: FHGFHRLHII DFDIGYGGQW ASLMQELVLR DNAAPLSLKI TVFASPANHD QLELGFTQDN LKHFASEINI SLDIQVLSLD LLGSISWPNS SEKEAVAVNI
401: SAASFSHLPL VLRFVKHLSP TIIVCSDRGC ERTDLPFSQQ LAHSLHSHTA LFESLDAVNA NLDAMQKIER FLIQPEIEKL VLDRSRPIER PMMTWQAMFL
501: QMGFSPVTHS NFTESQAECL VQRTPVRGFH VEKKHNSLLL CWQRTELVGV SAWRCRSS
Arabidopsis Description
SCL6Scarecrow-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O81316]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.