Factsheet for Os11t0160550-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G113300.1	Wheat	cytosol	68.76	66.88
TraesCS4D01G110800.1	Wheat	cytosol	68.33	66.46
TraesCS4A01G209800.1	Wheat	cytosol	68.33	66.46
HORVU4Hr1G020490.26	Barley	cytosol	68.11	66.24
Zm00001d053163_P001	Maize	cytosol	61.61	60.04
VIT_04s0044g00620.t01	Wine grape	cytosol	31.67	36.59
KRH43393	Soybean	cytosol	35.36	33.47
Os12t0162700-00	Rice	nucleus	25.6	31.98
PGSC0003DMT400010158	Potato	cytosol	32.1	29.96
Solyc11g005610.1.1	Tomato	cytosol	31.67	29.67
Os10t0551200-01	Rice	cytosol	20.39	23.62
Os03t0263300-01	Rice	cytosol	27.98	22.43
Os03t0103400-01	Rice	cytosol	21.48	20.89
Os06t0105350-00	Rice	plastid	20.82	19.63
Os04t0555000-01	Rice	cytosol	24.51	15.89
Os02t0663100-01	Rice	cytosol	24.3	15.66
Os02t0662700-01	Rice	cytosol	23.64	15.37
Os11t0160600-01	Rice	cytosol	0.43	4.0

Protein Annotations

MapMan:15.5.12	EntrezGene:9268651	UniProt:A0A0P0XZ16	ProteinID:BAT12792.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0043565	InterPro:IPR005202
EnsemblPlantsGene:Os11g0160550	EnsemblPlants:Os11t0160550-00	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF61
InterPro:TF_GRAS	UniParc:UPI0003939F0E	RefSeq:XP_015617104.1	SEG:seg	:	:

Description

Similar to GRAS family transcription factor containing protein. (Os11t0160550-00)

Coordinates

chr11:+:2950018..2951434

Molecular Weight (calculated)

50831.4 Da

IEP (calculated)

4.243

GRAVY (calculated)

0.147

Length

461 amino acids

Sequence
(BLAST)

001: METMSYPCSP LLSFPAHEES GYFIWSSQAA LHVDPCSDQQ EDLDLLDTMV LDSNELHQHD APDVDVSINC DDRIFGQESV NLAAIQEELL EEDSLSDLLL
101: AGAEAVEAGD SILASVAFSR LDDFLSGIPE NGAASSFDRL AYHFDQGLRS RMSSASTGCY QPEPLPSGNM LVHQIIQELS PFVKFAHFTT NQAILDAIIG
201: DMDVHVVDLN IGEGIQWSSL MSDLARCGGK SFRLTAITTY ADCHASTHDT VVRLLSEFAD SLELPFQYNS ICVHNEDELH AFFEDCKGSV IVSCDTTSMY
301: YKSLSTLQSL LLVCVKKLQP KLVVTIEEDL VRIGRGVSPS SASFVEFFFE ALHHFTTVFE SMASCFIGSS YEPCLRLVEM ELLGPRIQDF VVKYGSVRVE
401: ANASEVLEGF MACELSACNI AQARMLVGLF NRVFGVVCEK GRLALCWKSR PLISVSVWIP V

Best Arabidopsis Sequence Match ( AT4G08250.1 )
(BLAST)

001: MNYPYEDFLD LFFSTHTDPL ATAASTSSNG YSLNDLDIDW DCDFRDVIES IMGDEGAMME PESEAVPMLH DQEGLCNSAS TGLSVADGVS FGEPKTDESK
101: GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT
201: ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL
301: KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN
401: WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ

Arabidopsis Description

SCL26Scarecrow-like protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.