Factsheet for Solyc11g005610.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010158	Potato	cytosol	95.94	95.55
VIT_04s0044g00620.t01	Wine grape	cytosol	39.84	49.12
KRH43393	Soybean	cytosol	48.17	48.67
TraesCS4D01G110800.1	Wheat	cytosol	32.32	33.54
TraesCS4A01G209800.1	Wheat	cytosol	32.32	33.54
TraesCS4B01G113300.1	Wheat	cytosol	32.11	33.33
Zm00001d053163_P001	Maize	cytosol	31.71	32.98
HORVU4Hr1G020490.26	Barley	cytosol	31.71	32.91
Solyc11g013150.1.1	Tomato	cytosol	31.71	32.03
Os11t0160550-00	Rice	cytosol	29.67	31.67
KXG23028	Sorghum	cytosol	31.1	30.78
Zm00001d041919_P001	Maize	cytosol, peroxisome, plastid	29.07	29.07
Solyc08g078800.1.1	Tomato	plastid	20.53	21.31
Os12t0162700-00	Rice	nucleus	15.04	20.05
Solyc02g085600.1.1	Tomato	plastid	21.34	19.59
Solyc01g090950.2.1	Tomato	cytosol	22.56	14.43
Os11t0160600-01	Rice	cytosol	0.41	4.0

Protein Annotations

MapMan:15.5.12	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR005202	UniProt:K4D4H4	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF55
EnsemblPlantsGene:Solyc11g005610.1	EnsemblPlants:Solyc11g005610.1.1	InterPro:TF_GRAS	UniParc:UPI0002769900	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:474688..476166

Molecular Weight (calculated)

56153.1 Da

IEP (calculated)

5.200

GRAVY (calculated)

-0.182

Length

492 amino acids

Sequence
(BLAST)

001: MECENFQPNY INPYIEYSNL ETTFSWNNPS IINPQCSIQD FVTIVNDVDI LDYFPNDFDF IDGDVDIPLQ NTQQKIIQGD TELSREGQKS RVCNPRLKFL
101: QDHLMEETSV TDLLLMGAEA IEARNLDLAS IIVLRLNTIL PNQENRENSP VERLALYFTQ ALLCKTLNNS SHELLNLNQY QSEFTSSMTA FQMLQEISPY
201: VKFAHFTANQ AILEATKGSQ QVHILDFDII EGIQWPPLMV DLVERGNTNS SLRITSLVSD HSNSCHVEKT GQRLQEFANS INLPFMFDQI LLEDLEKLQV
301: VVEGHNNLIA NVMIHQLHMP QRGSSLVKTF FNGLRKLSPK LVVLVEEELF NLSKISSMPF VEFFCEALHH YTTIYDSILG GFGGGYKLAL RVIEKEFLRV
401: RILDSLRQFP SDKLERERWS KGLYSLKGFR QIPMSSSNVR QAKHLVSLFS GGYWVQNEQS KLALCWKSRP LTSASIWVPI SSTSSPSSSI SF

Best Arabidopsis Sequence Match ( AT4G08250.1 )
(BLAST)

001: MNYPYEDFLD LFFSTHTDPL ATAASTSSNG YSLNDLDIDW DCDFRDVIES IMGDEGAMME PESEAVPMLH DQEGLCNSAS TGLSVADGVS FGEPKTDESK
101: GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT
201: ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL
301: KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN
401: WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ

Arabidopsis Description

SCL26Scarecrow-like protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.