Factsheet for Solyc11g013150.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031475	Potato	cytosol	94.46	92.74
VIT_18s0001g03310.t01	Wine grape	cytosol	70.64	70.2
KRH53205	Soybean	cytosol	63.86	62.83
KRH64716	Soybean	cytosol	64.68	62.75
KRH18776	Soybean	cytosol	56.26	58.05
AT4G08250.1	Thale cress	cytosol	49.08	49.48
Bra002894.1-P	Field mustard	cytosol	47.84	48.64
GSMUA_Achr1P26740_001	Banana	cytosol	52.77	48.58
CDY45672	Canola	cytosol	48.05	47.85
CDY17336	Canola	cytosol	48.25	47.09
TraesCS4B01G215700.1	Wheat	cytosol	53.18	46.17
TraesCS4A01G088500.1	Wheat	cytosol	53.18	46.17
TraesCS4D01G216200.1	Wheat	cytosol	52.98	45.99
Os03t0263300-01	Rice	cytosol	53.8	45.57
Zm00001d028526_P001	Maize	cytosol	51.13	44.15
OQU92876	Sorghum	cytosol	50.31	44.06
HORVU4Hr1G061310.1	Barley	cytosol, mitochondrion, plastid	52.98	42.57
Solyc11g005610.1.1	Tomato	cytosol	32.03	31.71
Solyc08g078800.1.1	Tomato	plastid	20.33	20.89
Solyc02g085600.1.1	Tomato	plastid	21.56	19.59
Solyc01g090950.2.1	Tomato	cytosol	24.02	15.21

Protein Annotations

MapMan:15.5.12	MapMan:26.9.1.6.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR005202	UniProt:K4D6B9	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF25	InterPro:SCL26/NSP2	EnsemblPlantsGene:Solyc11g013150.1	EnsemblPlants:Solyc11g013150.1.1	InterPro:TF_GRAS	UniParc:UPI000276A2A8
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:6017978..6019441

Molecular Weight (calculated)

54338.4 Da

IEP (calculated)

5.568

GRAVY (calculated)

-0.215

Length

487 amino acids

Sequence
(BLAST)

001: MAMMVDETIT DFDCYGSLSI ATTTITTTTA TTSSSSWNDW SPVFDWDVFS GGDNFQDLIE SMVQGSGNCF YKSEHQDCAE FMEEEEESGD SNNNQSEDIN
101: GLKLVHLLMA AAEALTGVNK SRELARVILV RLKELASPNG ATNMERLAAY FTDALQALMA SGTLHTKHMF SPNYKDEHRQ GDVLAAFQLL QDMSPFVKFG
201: HFTANQAIFE SVTHDRRVHI IDYDIMEGIQ WASLMQALVS RKDGPPTPHL RITALSRSGS GRRSFGTVQE TGRRLTAFAA SIGQPFSFHH CRLDSDEIFK
301: PTNVKLVRGE ALIINCMLHL PHFSYRASDS VASFLSGSKT LNPRLVTLVE EELRPIGDEE GFVGRFMDTL HHYSALYDSL EAGFPLQSRA RALVERVFLG
401: PRITGSLARI YRARGEGERC SWGEWLSGVG FCESNISFAN HCQAKLLLGL FNDGYRMEEI GTNKLVLGWK SRRLLSASIW TTMDIDL

Best Arabidopsis Sequence Match ( AT4G08250.1 )
(BLAST)

001: MNYPYEDFLD LFFSTHTDPL ATAASTSSNG YSLNDLDIDW DCDFRDVIES IMGDEGAMME PESEAVPMLH DQEGLCNSAS TGLSVADGVS FGEPKTDESK
101: GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT
201: ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL
301: KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN
401: WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ

Arabidopsis Description

SCL26Scarecrow-like protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.