Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH64716 | Soybean | cytosol | 89.7 | 88.45 |
VIT_18s0001g03310.t01 | Wine grape | cytosol | 70.51 | 71.22 |
KRH18776 | Soybean | cytosol | 62.22 | 65.25 |
PGSC0003DMT400031475 | Potato | cytosol | 64.85 | 64.72 |
Solyc11g013150.1.1 | Tomato | cytosol | 62.83 | 63.86 |
Bra002894.1-P | Field mustard | cytosol | 51.52 | 53.24 |
AT4G08250.1 | Thale cress | cytosol | 51.72 | 53.0 |
CDY45672 | Canola | cytosol | 52.12 | 52.76 |
GSMUA_Achr1P26740_001 | Banana | cytosol | 55.15 | 51.61 |
CDY17336 | Canola | cytosol | 51.92 | 51.5 |
TraesCS4A01G088500.1 | Wheat | cytosol | 54.95 | 48.48 |
TraesCS4D01G216200.1 | Wheat | cytosol | 54.75 | 48.31 |
TraesCS4B01G215700.1 | Wheat | cytosol | 54.75 | 48.31 |
Os03t0263300-01 | Rice | cytosol | 55.35 | 47.65 |
Zm00001d028526_P001 | Maize | cytosol | 54.14 | 47.52 |
OQU92876 | Sorghum | cytosol | 52.93 | 47.12 |
HORVU4Hr1G061310.1 | Barley | cytosol, mitochondrion, plastid | 54.34 | 44.39 |
KRH43393 | Soybean | cytosol | 31.52 | 32.03 |
KRH28630 | Soybean | plastid | 22.63 | 21.71 |
KRH76844 | Soybean | plastid | 22.22 | 20.95 |
KRH69945 | Soybean | plastid | 21.21 | 20.08 |
KRH08304 | Soybean | plastid | 21.01 | 19.26 |
KRH75351 | Soybean | cytosol | 24.04 | 15.99 |
KRG88927 | Soybean | cytosol | 24.04 | 15.97 |
KRH65380 | Soybean | cytosol | 22.22 | 15.03 |
KRH76167 | Soybean | cytosol | 22.02 | 14.79 |
Protein Annotations
MapMan:15.5.12 | MapMan:26.9.1.6.2 | EMBL:ACUP02003453 | EnsemblPlantsGene:GLYMA_06G110800 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 | UniProt:K7KUH0 | EnsemblPlants:KRH53205 |
ProteinID:KRH53205 | ProteinID:KRH53205.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF25 |
InterPro:SCL26/NSP2 | InterPro:TF_GRAS | UniParc:UPI00023C3A24 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:-:8955809..8957296
Molecular Weight (calculated)
54283.7 Da
IEP (calculated)
6.315
GRAVY (calculated)
-0.275
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIDAIHNLD FSGYSTITNT TPSSDDDYGC NWNHWSPVVN WDAFTGAHDD FHQIIDSIMC DGAAPEEDNL SPDDHVASNS PSVSITEEDD DAGDDSKGLR
101: LVHLLMAAAE ALSGAPKSRD LARVILVRLK ELVSSHAAPH GSTMERLAAY FTDALQGLLE GAGGAHNNNN KHHHHYITSC GPHHHHRDDH HHQNDTLAAF
201: QLLQDMSPYV KFGHFTANQA ILEAVAHDRR VHIVDYDIME GVQWASLIQA LASNKTGPPG PHLRITALSR TGSGRRSIAT VQETGRRLAA FAASLGQPFS
301: FHHCRLEPDE TFKPSSLKLV RGEALVFNCM LNLPHLSYRA PESVASFLSG AKALKPRLVT LVEEEVASIV GGFVARFMDS LHHYSAVFDS LEAGFPMQGR
401: ARALVERVFL GPRIVGSLAR MGEEEERGSW GEWLGAAGFR GVPMSFANHC QAKLLIGLFN DGYRVEELGS NKLVLDWKSR RLLSASLWTS SSHSD
101: LVHLLMAAAE ALSGAPKSRD LARVILVRLK ELVSSHAAPH GSTMERLAAY FTDALQGLLE GAGGAHNNNN KHHHHYITSC GPHHHHRDDH HHQNDTLAAF
201: QLLQDMSPYV KFGHFTANQA ILEAVAHDRR VHIVDYDIME GVQWASLIQA LASNKTGPPG PHLRITALSR TGSGRRSIAT VQETGRRLAA FAASLGQPFS
301: FHHCRLEPDE TFKPSSLKLV RGEALVFNCM LNLPHLSYRA PESVASFLSG AKALKPRLVT LVEEEVASIV GGFVARFMDS LHHYSAVFDS LEAGFPMQGR
401: ARALVERVFL GPRIVGSLAR MGEEEERGSW GEWLGAAGFR GVPMSFANHC QAKLLIGLFN DGYRVEELGS NKLVLDWKSR RLLSASLWTS SSHSD
001: MNYPYEDFLD LFFSTHTDPL ATAASTSSNG YSLNDLDIDW DCDFRDVIES IMGDEGAMME PESEAVPMLH DQEGLCNSAS TGLSVADGVS FGEPKTDESK
101: GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT
201: ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL
301: KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN
401: WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ
101: GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT
201: ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL
301: KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN
401: WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ
Arabidopsis Description
SCL26Scarecrow-like protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.