Factsheet for Zm00001d028526_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92876	Sorghum	cytosol	94.68	96.04
TraesCS4B01G215700.1	Wheat	cytosol	79.79	80.21
TraesCS4A01G088500.1	Wheat	cytosol	79.61	80.04
TraesCS4D01G216200.1	Wheat	cytosol	79.43	79.86
Os03t0263300-01	Rice	cytosol	81.38	79.83
HORVU4Hr1G061310.1	Barley	cytosol, mitochondrion, plastid	80.5	74.92
GSMUA_Achr1P26740_001	Banana	cytosol	55.67	59.36
VIT_18s0001g03310.t01	Wine grape	cytosol	48.94	56.33
KRH53205	Soybean	cytosol	47.52	54.14
KRH64716	Soybean	cytosol	47.34	53.19
PGSC0003DMT400031475	Potato	cytosol	45.04	51.21
Solyc11g013150.1.1	Tomato	cytosol	44.15	51.13
KRH18776	Soybean	cytosol	42.55	50.85
Bra002894.1-P	Field mustard	cytosol	37.41	44.05
CDY45672	Canola	cytosol	37.41	43.15
CDY17336	Canola	cytosol	37.59	42.48
AT4G08250.1	Thale cress	cytosol	35.99	42.03
Zm00001d022034_P001	Maize	cytosol	15.25	28.1
Zm00001d041919_P001	Maize	cytosol, peroxisome, plastid	24.47	28.05
Zm00001d053163_P001	Maize	cytosol	21.45	25.58
Zm00001d027292_P001	Maize	peroxisome	18.79	22.04
Zm00001d045589_P001	Maize	cytosol	17.55	19.8
Zm00001d047957_P001	Maize	cytosol	4.26	18.6
Zm00001d035873_P001	Maize	cytosol, plastid	9.04	17.83
Zm00001d029855_P001	Maize	mitochondrion	18.26	15.97
Zm00001d026158_P001	Maize	cytosol	20.21	15.88
Zm00001d002718_P001	Maize	cytosol	20.04	15.67
Zm00001d027569_P001	Maize	plastid	8.69	15.65
Zm00001d018956_P001	Maize	plastid	3.9	15.38
Zm00001d051387_P001	Maize	cytosol	18.97	15.11
Zm00001d017513_P001	Maize	cytosol, mitochondrion, nucleus	17.91	14.31
Zm00001d022162_P001	Maize	cytosol	4.08	13.94
Zm00001d042852_P001	Maize	cytosol	5.67	13.01
Zm00001d002023_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	8.16	12.99
Zm00001d031615_P001	Maize	cytosol	5.32	11.03

Protein Annotations

EntrezGene:103634103	MapMan:15.5.12	MapMan:26.9.1.6.2	UniProt:A0A060CZR1	ProteinID:AIB04510.1	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005202	ProteinID:ONL96267.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF25
InterPro:SCL26/NSP2	InterPro:TF_GRAS	UniParc:UPI000221967C	EnsemblPlantsGene:Zm00001d028526	EnsemblPlants:Zm00001d028526_P001	EnsemblPlants:Zm00001d028526_T001
SEG:seg	:	:	:	:	:

Description

GRAS-transcription factor 61Scarecrow-like protein 26

Coordinates

chr1:+:38187938..38189632

Molecular Weight (calculated)

59838.5 Da

IEP (calculated)

4.956

GRAVY (calculated)

-0.152

Length

564 amino acids

Sequence
(BLAST)

001: MEVTMDDVAG DLEFSGCSST TTSPSSPSLD DGMGMYAWNA LSPVTDWGSL CPDDGAQDLH GLIESMLYDD TLLGSADLNP AMFPDDVYCC SNGSAPSSTT
101: TTNPGTPVND GDAQKGDCHE KGLRLLHLLM AAAEALSGPQ KSRELARVIL VRLKQMVSHI GDNAAVSNME RLATHFTDAL QGLLDGSHPV GGAGKQAAAA
201: ASHGHQQHTG DVLTAFQMLQ DMSPYMKFGH FTANQAILEA VAGERRVHVV DYDIAEGVQW ASLMQAMTSR PDGVPPPHLR ITAVSRGGGG SARAVQEAGR
301: RLAAFAASVG QPFSFGQCRL DSDERFRPAT VRMVKGETLV ANCVLNQAAA TTTVRRPTGS VASFLAGMAT LGAKVVTVVE EDQGHAEKDD EGAGGFVARF
401: MEELHRYSAV WDSLEAGFPT QSRVRGLVER AILAPNIAGA VSRAYRAVDG DGEARAGWGE WMRGNGFRAV PLSCFNHSQA RLLLGLFNDG YTMEETSPNK
501: IVLGWKARRL LSASVWAPPP VSVPSSPTEG AFQPVGMSPD SGGVGRVDFD YIDSFFVEPA YALV

Best Arabidopsis Sequence Match ( AT4G08250.1 )
(BLAST)

001: MNYPYEDFLD LFFSTHTDPL ATAASTSSNG YSLNDLDIDW DCDFRDVIES IMGDEGAMME PESEAVPMLH DQEGLCNSAS TGLSVADGVS FGEPKTDESK
101: GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT
201: ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL
301: KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN
401: WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ

Arabidopsis Description

SCL26Scarecrow-like protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.