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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G216200.1 Wheat cytosol 98.75 98.75
TraesCS4B01G215700.1 Wheat cytosol 98.75 98.75
HORVU4Hr1G061310.1 Barley cytosol, mitochondrion, plastid 97.15 89.93
Os03t0263300-01 Rice cytosol 83.42 81.39
OQU92876 Sorghum cytosol 79.32 80.04
Zm00001d028526_P001 Maize cytosol 80.04 79.61
GSMUA_Achr1P26740_001 Banana cytosol 56.68 60.11
VIT_18s0001g03310.t01 Wine grape cytosol 49.2 56.33
KRH53205 Soybean cytosol 48.48 54.95
PGSC0003DMT400031475 Potato cytosol 47.95 54.23
KRH64716 Soybean cytosol 47.59 53.19
Solyc11g013150.1.1 Tomato cytosol 46.17 53.18
KRH18776 Soybean cytosol 44.21 52.54
Bra002894.1-P Field mustard cytosol 38.32 44.89
CDY45672 Canola cytosol 38.32 43.97
CDY17336 Canola cytosol 38.5 43.29
AT4G08250.1 Thale cress cytosol 36.72 42.65
TraesCS4A01G209800.1 Wheat cytosol 23.35 27.64
TraesCS4A01G482000.1 Wheat plastid 19.61 20.26
TraesCS7A01G014200.1 Wheat plastid 19.79 19.11
TraesCS5A01G535000.1 Wheat cytosol, mitochondrion, peroxisome, plastid 19.43 17.11
TraesCS1A01G209400.1 Wheat mitochondrion, plastid 18.54 16.64
TraesCS6A01G247200.1 Wheat mitochondrion 20.5 16.34
Protein Annotations
EnsemblPlants:TraesCS4A01G088500.1EnsemblPlantsGene:TraesCS4A01G088500InterPro:IPR005202InterPro:SCL26/NSP2InterPro:TF_GRASPANTHER:PTHR31636
PANTHER:PTHR31636:SF25PFAM:PF03514PFscan:PS50985SEG:segMapMan:15.5.12MapMan:26.9.1.6.2
Description
No Description!
Coordinates
chr4A:+:93980174..93981859
Molecular Weight (calculated)
59865.6 Da
IEP (calculated)
5.132
GRAVY (calculated)
-0.184
Length
561 amino acids
Sequence
(BLAST)
001: MDVTMEDVVG DLEISGYSSI STSPSSSLDD GMGLYGWNAL SPVADWGLFS SDDGGHDLHG LIESMLCDDA LIGKPDEHPT MFTDGPCYSN ASEPSSTTTT
101: NPGTPVQHDD TPDCNPEKGL RLLHLLMAAA EALSGPHKSR ELARVILVRL KEMVSSTSGN AGASNMERLA AHFTDALQGL LDGSHSVAGT SRQAAMAASH
201: HHSTGDVLTA FQMLQDMSPY MKFGHFTANQ AILEAVAGDR RVHIVDYDLA EGIQWASLMQ AMTSRPDGVS PPHLRITAIT RSGGGGARAV QEAGRRLAAF
301: AGSIGQPFSF GHCRLDSDER FRPATVRMVK GETLVANCIL HQAAATTTVR RPTGSVASFL TGMASLGAKV VTVVEEEGEA EKNEEEASDA AAGGFVGRFM
401: EELHRYSAVW DSLEAGFPTQ SRVRGLVERV ILAPNIAGAV SRAYRGTDGE GRRGWGEWMR GSGFEMVPLS CFNHSQARLL LGLFNDGYTV EETRPNKIVL
501: GWKARRLLSA SVWAPPPLSV PSSPADGVCQ PMGMAPSSGG FGRTEYDYVD SFLVEPAYAL V
Best Arabidopsis Sequence Match ( AT4G08250.1 )
(BLAST)
001: MNYPYEDFLD LFFSTHTDPL ATAASTSSNG YSLNDLDIDW DCDFRDVIES IMGDEGAMME PESEAVPMLH DQEGLCNSAS TGLSVADGVS FGEPKTDESK
101: GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT
201: ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL
301: KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN
401: WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ
Arabidopsis Description
SCL26Scarecrow-like protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.