CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00620.t01	Wine grape	cytosol	46.41	56.64
PGSC0003DMT400010158	Potato	cytosol	49.28	48.58
Solyc11g005610.1.1	Tomato	cytosol	48.67	48.17
Os11t0160550-00	Rice	cytosol	33.47	35.36
TraesCS4D01G110800.1	Wheat	cytosol	33.88	34.81
TraesCS4A01G209800.1	Wheat	cytosol	33.68	34.6
TraesCS4B01G113300.1	Wheat	cytosol	33.47	34.39
Zm00001d053163_P001	Maize	cytosol	33.26	34.25
HORVU4Hr1G020490.26	Barley	cytosol	33.26	34.18
KRH18776	Soybean	cytosol	31.62	32.63
KRH53205	Soybean	cytosol	32.03	31.52
KXG23028	Sorghum	cytosol	31.83	31.19
KRH64716	Soybean	cytosol	32.03	31.08
Zm00001d041919_P001	Maize	cytosol, peroxisome, plastid	29.57	29.27
Os12t0162700-00	Rice	nucleus	13.96	18.43
KRH28630	Soybean	plastid	18.48	17.44
KRH69945	Soybean	plastid	18.28	17.02
KRH08304	Soybean	plastid	18.28	16.48
KRH76844	Soybean	plastid	17.66	16.38
KRG88927	Soybean	cytosol	20.74	13.56
KRH65380	Soybean	cytosol	20.33	13.52
KRH75351	Soybean	cytosol	20.53	13.44
KRH76167	Soybean	cytosol	20.12	13.3
Os11t0160600-01	Rice	cytosol	0.41	4.0

Protein Annotations

EntrezGene:100804613	MapMan:15.5.12	EMBL:ACUP02004853	EnsemblPlantsGene:GLYMA_08G146900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	UniProt:K7L6R7	EnsemblPlants:KRH43393
ProteinID:KRH43393	ProteinID:KRH43393.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF55
InterPro:TF_GRAS	UniParc:UPI0002958E04	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:11182926..11184622

Molecular Weight (calculated)

55683.6 Da

IEP (calculated)

4.484

GRAVY (calculated)

-0.157

Length

487 amino acids

Sequence
(BLAST)

001: MKTMDFEQFY YSFGPPYMNQ LHECISENAF PFQTENLLSP NTFLDEMFDQ EYSMEGLLQQ HANNQEDFGF LKHDDPLETE FCHGFSPSAE ENMHVSMEEG
101: DSCLKGIQAE LMEETSLADL LLTGAEAVEA QNWPLASDII EKLNNASSLE NGDGLLNRLA LFFTQSLYYK STNAPELLQC GAVSTHTNAF CVFQVLQELS
201: PYVKFAHFTA NQAILEATEG AEDLHIIDFD IMEGIQWPPL MVDLAMKKSV NSLRVTAITV NQRGADSVQQ TGRRLKEFAA SINFPFMFDQ LMMEREEDFQ
301: GIELGQTLIV NCMIHQWMPN RSFSLVKTFL DGVTKLSPRL VVLVEEELFN FPRLKSMSFV EFFCEALHHY TALCDSLASN LWGSHKMELS LIEKEVIGLR
401: ILDSVRQFPC ERKERMVWEE GFYSLKGFKR VPMSTCNISQ AKFLVSLFGG GYWVQYEKGR LALCWKSRPL TVASIWEPMA YLDDKVK

Best Arabidopsis Sequence Match ( AT1G55580.1 )
(BLAST)

001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK

Arabidopsis Description

SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.