Factsheet for Solyc02g085600.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033037	Potato	plastid	95.71	94.13
VIT_04s0023g01380.t01	Wine grape	plastid	51.87	51.67
CDY13032	Canola	cytosol	45.71	49.7
CDY43895	Canola	cytosol	45.34	49.49
Bra028100.1-P	Field mustard	cytosol	45.15	49.29
CDX75590	Canola	cytosol	44.59	49.08
CDX72597	Canola	cytosol	42.16	49.02
AT4G36710.1	Thale cress	cytosol	44.22	48.77
CDX69238	Canola	cytosol	44.4	48.67
KRH28630	Soybean	plastid	46.83	48.64
KRH76844	Soybean	plastid	47.57	48.57
KRH69945	Soybean	plastid	47.39	48.57
KRH08304	Soybean	plastid	48.88	48.52
Bra011700.1-P	Field mustard	cytosol	44.4	34.39
GSMUA_Achr3P29970_001	Banana	cytosol	32.46	32.77
GSMUA_Achr4P03460_001	Banana	cytosol, plastid	30.97	31.09
GSMUA_Achr4P07190_001	Banana	plastid	28.92	29.69
Solyc08g078800.1.1	Tomato	plastid	24.81	28.06
Solyc01g090950.2.1	Tomato	cytosol	31.9	22.24
Solyc11g013150.1.1	Tomato	cytosol	19.59	21.56
Solyc11g005610.1.1	Tomato	cytosol	19.59	21.34

Protein Annotations

MapMan:15.5.12	ProteinID:AAG01129.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0048831	InterPro:IPR005202	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF53	UniProt:Q9FYW2	EnsemblPlantsGene:Solyc02g085600.1	EnsemblPlants:Solyc02g085600.1.1
InterPro:TF_GRAS	UniParc:UPI000009E3DC	SEG:seg	:	:	:

Description

Scarecrow-like protein 15 [Source:Projected from Arabidopsis thaliana (AT4G36710) UniProtKB/Swiss-Prot;Acc:O23210]

Coordinates

chr2:+:48430009..48431619

Molecular Weight (calculated)

59388.6 Da

IEP (calculated)

5.488

GRAVY (calculated)

-0.082

Length

536 amino acids

Sequence
(BLAST)

001: MKVPFSTNDN VSSKPLVNSN NSFTFPAATN GSNLCYEPKS VLELRRSPSP IVDKQIITTN PDLSALCGGE DPLQLGDHVL SNFEDWDSLM RELGLHDDSA
101: SLSKTNPLTH SESLTQFHNL SEFSAESNQF PSPDFSFSDT NFPQQFPTVN QASFINALDL SGDIHQNWSV GFDYVDELIR FAECFETNAF QLAHVILARL
201: NQRLRSAAGK PLQRAAFYFK EALQAQLAGS ARQTRSSSSS DVIQTIKSYK ILSNISPIPM FSSFTANQAV LEAVDGSMLV HVIDFDIGLG GHWASFMKEL
301: ADKAECRKAN APILRITALV PEEYAVESRL IRENLTQFAR ELNIGFEIDF VLIRTFELLS FKAIKFMEGE KTAVLLSPAI FRRVGSGFVN ELRRISPNVV
401: VHVDSEGLMG YGAMSFRQTV IDGLEFYSTL LESLEAANIG GGNCGDWMRK IENFVLFPKI VDMIGAVGRR GGGGSWRDAM VDAGFRPVGL SQFADFQADC
501: LLGRVQVRGF HVAKRQAEML LCWHDRALVA TSAWRC

Best Arabidopsis Sequence Match ( AT4G36710.1 )
(BLAST)

001: MKIPASSPQD TTNNNNNTNS TDSNHLSMDE HVMRSMDWDS IMKELELDDD SAPNSLKTGF TTTTTDSTIL PLYAVDSNLP GFPDQIQPSD FESSSDVYPG
101: QNQTTGYGFN SLDSVDNGGF DFIEDLIRVV DCVESDELQL AQVVLSRLNQ RLRSPAGRPL QRAAFYFKEA LGSFLTGSNR NPIRLSSWSE IVQRIRAIKE
201: YSGISPIPLF SHFTANQAIL DSLSSQSSSP FVHVVDFEIG FGGQYASLMR EITEKSVSGG FLRVTAVVAE ECAVETRLVK ENLTQFAAEM KIRFQIEFVL
301: MKTFEMLSFK AIRFVEGERT VVLISPAIFR RLSGITDFVN NLRRVSPKVV VFVDSEGWTE IAGSGSFRRE FVSALEFYTM VLESLDAAAP PGDLVKKIVE
401: AFVLRPKISA AVETAADRRH TGEMTWREAF CAAGMRPIQL SQFADFQAEC LLEKAQVRGF HVAKRQGELV LCWHGRALVA TSAWRF

Arabidopsis Description

SCL15HAM4 [Source:UniProtKB/TrEMBL;Acc:A0A178UVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.