Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56248 | Canola | cytosol | 97.63 | 82.2 |
| AT2G45160.1 | Thale cress | cytosol | 85.38 | 67.5 |
| Bra014479.1-P | Field mustard | cytosol, peroxisome, plastid | 24.11 | 67.03 |
| Bra000375.1-P | Field mustard | cytosol | 79.45 | 66.23 |
| Zm00001d022034_P001 | Maize | cytosol | 23.72 | 39.22 |
| Bra037319.1-P | Field mustard | cytosol, plastid | 42.29 | 38.08 |
| GSMUA_Achr6P36740_001 | Banana | cytosol | 34.98 | 37.11 |
| Os10t0551200-01 | Rice | cytosol | 28.46 | 36.18 |
| GSMUA_Achr1P05940_001 | Banana | plastid | 36.36 | 34.85 |
| Zm00001d047957_P001 | Maize | cytosol | 8.5 | 33.33 |
| VIT_15s0048g00270.t01 | Wine grape | extracellular, golgi, mitochondrion, nucleus | 50.0 | 32.65 |
| KRG88927 | Soybean | cytosol | 47.43 | 32.21 |
| KRH75351 | Soybean | cytosol | 46.64 | 31.72 |
| Zm00001d035873_P001 | Maize | cytosol, plastid | 17.79 | 31.47 |
| PGSC0003DMT400066799 | Potato | cytosol, nucleus, vacuole | 46.64 | 30.73 |
| Solyc01g090950.2.1 | Tomato | cytosol | 46.44 | 30.56 |
| KRH76167 | Soybean | cytosol | 44.47 | 30.53 |
| Zm00001d027292_P001 | Maize | peroxisome | 28.85 | 30.35 |
| KRH65380 | Soybean | cytosol | 43.48 | 30.05 |
| Os06t0105350-00 | Rice | plastid | 28.66 | 29.65 |
| GSMUA_Achr5P20860_001 | Banana | cytosol | 32.02 | 29.24 |
| Zm00001d045589_P001 | Maize | cytosol | 28.66 | 29.0 |
| Os03t0103400-01 | Rice | cytosol | 27.08 | 28.9 |
| TraesCS7D01G011400.1 | Wheat | plastid | 30.24 | 28.76 |
| TraesCS4A01G482000.1 | Wheat | plastid | 30.63 | 28.55 |
| EER87695 | Sorghum | cytosol, plastid | 28.66 | 28.27 |
| GSMUA_Achr11P... | Banana | cytosol | 33.2 | 28.24 |
| Zm00001d018956_P001 | Maize | plastid | 7.71 | 27.27 |
| TraesCS7A01G014200.1 | Wheat | plastid | 30.63 | 26.68 |
| Zm00001d027569_P001 | Maize | plastid | 16.21 | 26.2 |
| GSMUA_Achr8P11160_001 | Banana | cytosol | 34.19 | 25.94 |
| Bra028100.1-P | Field mustard | cytosol | 25.1 | 25.87 |
| TraesCS1D01G212800.1 | Wheat | cytosol | 31.62 | 25.76 |
| TraesCS6D01G229400.1 | Wheat | mitochondrion | 35.97 | 25.74 |
| TraesCS6B01G277400.1 | Wheat | mitochondrion | 35.57 | 25.71 |
| HORVU1Hr1G053510.1 | Barley | plastid | 31.42 | 25.65 |
| TraesCS1B01G223400.1 | Wheat | cytosol, plastid | 31.62 | 25.64 |
| TraesCS1A01G209400.1 | Wheat | mitochondrion, plastid | 31.62 | 25.6 |
| TraesCS6A01G247200.1 | Wheat | mitochondrion | 35.57 | 25.57 |
| HORVU6Hr1G063650.1 | Barley | cytosol, mitochondrion, nucleus, plasma membrane | 35.38 | 25.46 |
| Os02t0662700-01 | Rice | cytosol | 35.38 | 25.25 |
| Zm00001d051387_P001 | Maize | cytosol | 34.98 | 25.0 |
| TraesCS5A01G535000.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 31.42 | 24.96 |
| EES11245 | Sorghum | cytosol, nucleus, peroxisome | 35.18 | 24.72 |
| Zm00001d002718_P001 | Maize | cytosol | 35.18 | 24.69 |
| TraesCS4D01G360200.1 | Wheat | cytosol | 31.23 | 24.61 |
| TraesCS4B01G367300.1 | Wheat | cytosol | 31.23 | 24.61 |
| EES05768 | Sorghum | cytosol | 34.78 | 24.58 |
| Os02t0663100-01 | Rice | cytosol | 34.59 | 24.48 |
| EER91968 | Sorghum | cytosol, mitochondrion | 30.83 | 24.38 |
| Zm00001d022162_P001 | Maize | cytosol | 7.91 | 24.24 |
| Os04t0555000-01 | Rice | cytosol | 33.99 | 24.19 |
| Zm00001d026158_P001 | Maize | cytosol | 34.19 | 24.09 |
| Zm00001d029855_P001 | Maize | mitochondrion | 30.63 | 24.03 |
| GSMUA_Achr11P... | Banana | cytosol | 32.81 | 23.99 |
| HORVU4Hr1G087700.2 | Barley | cytosol, mitochondrion, peroxisome, plastid | 30.24 | 23.98 |
| Zm00001d017513_P001 | Maize | cytosol, mitochondrion, nucleus | 32.81 | 23.51 |
| Zm00001d042852_P001 | Maize | cytosol | 11.26 | 23.17 |
| Bra002894.1-P | Field mustard | cytosol | 19.37 | 20.46 |
| Zm00001d031615_P001 | Maize | cytosol | 10.87 | 20.22 |
| Bra011700.1-P | Field mustard | cytosol | 27.47 | 20.09 |
| Zm00001d002023_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 13.83 | 19.77 |
| OQU85680 | Sorghum | mitochondrion | 24.51 | 19.17 |
Protein Annotations
| EnsemblPlants:Bra003311.1 | EnsemblPlants:Bra003311.1-P | EnsemblPlantsGene:Bra003311 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF11 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI0002541622 |
| UniProt:M4CGH8 | MapMan:15.5.12 | : | : | : | : |
Description
AT2G45160 (E=5e-175) | scarecrow transcription factor family protein
Coordinates
chrA07:+:12544895..12546415
Molecular Weight (calculated)
56477.6 Da
IEP (calculated)
5.438
GRAVY (calculated)
-0.317
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNDLDDGG QEQSILRLIM DPGSGFGVFD PGFGFGSGSV PVNPLLSSSF PYQEELTFSN PPSSPPAKRF NSGSHQPVFP FPDPDPGHDP FLVRRQQQFQ
101: FPFQFHQQQQ LPSSSSSLPP VPPPGTAGDD QTVIIEQLFN AAELIGNNNN NGDHTALAQG ILARLNHHLS YSNNNNNNNK NPPFQRAASH ITESLLSLIN
201: NASPPLISPE NLILRIAAYR TFSETSPFLQ FVNFTANQSI LESCNDELGF DRIHIIDFDV GYGGQWSSLM QELASRRRNR ASSLKITVFA PPPSTVSDEF
301: ELRFTEENLR SFAGEVKIPF EIELLSLELL LNPAYWPVSL RSSEKEAVAV NLPVNSVVSG YLPLILRFLK QISPNVVVCS DRGCDRNDAP FPNAVIHALQ
401: YHTTLLESLD ANQGHEDESV ERFWVQPSIE KLLMKRHRWI ERSPPWRSLF AQCGFSPASL SQTAEAQAEC LLQRSLVRGF YVEKRQGSLV MCWQRKELVT
501: VSAWKC
101: FPFQFHQQQQ LPSSSSSLPP VPPPGTAGDD QTVIIEQLFN AAELIGNNNN NGDHTALAQG ILARLNHHLS YSNNNNNNNK NPPFQRAASH ITESLLSLIN
201: NASPPLISPE NLILRIAAYR TFSETSPFLQ FVNFTANQSI LESCNDELGF DRIHIIDFDV GYGGQWSSLM QELASRRRNR ASSLKITVFA PPPSTVSDEF
301: ELRFTEENLR SFAGEVKIPF EIELLSLELL LNPAYWPVSL RSSEKEAVAV NLPVNSVVSG YLPLILRFLK QISPNVVVCS DRGCDRNDAP FPNAVIHALQ
401: YHTTLLESLD ANQGHEDESV ERFWVQPSIE KLLMKRHRWI ERSPPWRSLF AQCGFSPASL SQTAEAQAEC LLQRSLVRGF YVEKRQGSLV MCWQRKELVT
501: VSAWKC
001: MPLSFERFQG EGVFGLSSSS FYSDSQKIWS NQDKTEAKQE DLGYVVGGFL PEPTSVLDAL RSPSPLASYS STTTTLSSSH GGGGTTVTNT TVTAGDDNNN
101: NKCSQMGLDD LDGVLSASSP GQEQSILRLI MDPGSAFGVF DPGFGFGSGS GPVSAPVSDN SNLLCNFPFQ EITNPAEALI NPSNHCLFYN PPLSPPAKRF
201: NSGSLHQPVF PLSDPDPGHD PVRRQHQFQF PFYHNNQQQQ FPSSSSSTAV AMVPVPSPGM AGDDQSVIIE QLFNAAELIG TTGNNNGDHT VLAQGILARL
301: NHHLNTSSNH KSPFQRAASH IAEALLSLIH NESSPPLITP ENLILRIAAY RSFSETSPFL QFVNFTANQS ILESCNESGF DRIHIIDFDV GYGGQWSSLM
401: QELASGVGGR RRNRASSLKL TVFAPPPSTV SDEFELRFTE ENLKTFAGEV KIPFEIELLS VELLLNPAYW PLSLRSSEKE AIAVNLPVNS VASGYLPLIL
501: RFLKQLSPNI VVCSDRGCDR NDAPFPNAVI HSLQYHTSLL ESLDANQNQD DSSIERFWVQ PSIEKLLMKR HRWIERSPPW RILFTQCGFS PASLSQMAEA
601: QAECLLQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
101: NKCSQMGLDD LDGVLSASSP GQEQSILRLI MDPGSAFGVF DPGFGFGSGS GPVSAPVSDN SNLLCNFPFQ EITNPAEALI NPSNHCLFYN PPLSPPAKRF
201: NSGSLHQPVF PLSDPDPGHD PVRRQHQFQF PFYHNNQQQQ FPSSSSSTAV AMVPVPSPGM AGDDQSVIIE QLFNAAELIG TTGNNNGDHT VLAQGILARL
301: NHHLNTSSNH KSPFQRAASH IAEALLSLIH NESSPPLITP ENLILRIAAY RSFSETSPFL QFVNFTANQS ILESCNESGF DRIHIIDFDV GYGGQWSSLM
401: QELASGVGGR RRNRASSLKL TVFAPPPSTV SDEFELRFTE ENLKTFAGEV KIPFEIELLS VELLLNPAYW PLSLRSSEKE AIAVNLPVNS VASGYLPLIL
501: RFLKQLSPNI VVCSDRGCDR NDAPFPNAVI HSLQYHTSLL ESLDANQNQD DSSIERFWVQ PSIEKLLMKR HRWIERSPPW RILFTQCGFS PASLSQMAEA
601: QAECLLQRNP VRGFHVEKRQ SSLVMCWQRK ELVTVSAWKC
Arabidopsis Description
SCL27Scarecrow-like protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJM8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.