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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG88927
KRH65380
KRH75351
KRH76167

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G60490.1 KRG88927 AT3G60630.1 21798944
AT1G60490.1 KRH65380 AT3G60630.1 21798944
AT1G60490.1 KRH75351 AT3G60630.1 21798944
AT1G60490.1 KRH76167 AT3G60630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH62223 Soybean cytosol 95.94 95.7
VIT_01s0127g00430.t01 Wine grape cytosol 87.32 86.99
Solyc04g015350.2.1 Tomato cytosol 84.85 84.54
Bra027152.1-P Field mustard cytosol 72.29 82.44
KXG24803 Sorghum cytosol 14.9 81.21
AT1G60490.1 Thale cress cytosol 80.67 80.47
CDY47220 Canola cytosol 80.17 80.07
CDY53049 Canola cytosol 79.68 79.58
GSMUA_Achr1P21120_001 Banana cytosol 81.28 74.66
TraesCS5D01G065700.1 Wheat cytosol, plastid 74.51 73.51
Os05t0180600-02 Rice cytosol 73.52 73.34
TraesCS5A01G054400.1 Wheat cytosol, plastid 74.01 73.03
TraesCS5B01G062000.3 Wheat cytosol, plastid 74.14 70.41
Zm00001d050219_P004 Maize cytosol, plasma membrane 70.94 69.48
HORVU5Hr1G013230.1 Barley cytosol, plastid 73.89 67.04
Os08t0307400-02 Rice cytosol 59.36 58.28
KRH53891 Soybean nucleus 12.32 9.13
KRH64048 Soybean nucleus 12.32 9.1
KRH59566 Soybean cytosol 12.19 8.9
KRH43548 Soybean cytosol 12.19 8.9
KRH60863 Soybean cytosol 18.97 7.57
KRH51547 Soybean nucleus 16.75 7.06
Protein Annotations
Gene3D:1.10.1070.11Gene3D:1.25.40.70EntrezGene:100778348Gene3D:2.60.40.150MapMan:22.5.1.1MapMan:27.5.1.1
Gene3D:3.30.1010.10EMBL:ACUP02003444InterPro:ARM-type_foldInterPro:C2_domain_sfEnsemblPlantsGene:GLYMA_06G096300GO:GO:0000045
GO:GO:0000166GO:GO:0000407GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005768GO:GO:0005777
GO:GO:0006464GO:GO:0006468GO:GO:0006629GO:GO:0006810GO:GO:0006897GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016043GO:GO:0016197GO:GO:0016301GO:GO:0016303GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0030242GO:GO:0034271GO:GO:0034272GO:GO:0036092
GO:GO:0046854GO:GO:0048015UniProt:I1K9Q4InterPro:IPR000403InterPro:IPR001263InterPro:IPR002420
InterPro:IPR035892InterPro:IPR036940ProteinID:KRH52942.1EnsemblPlants:KRH52943ProteinID:KRH52943ProteinID:KRH52943.1
InterPro:Kinase-like_dom_sfInterPro:MHC_I/II-like_Ag-recogPFAM:PF00454PFAM:PF00613PFAM:PF00792InterPro:PI3/4_kinase_CS
InterPro:PI3/4_kinase_cat_domInterPro:PI3/4_kinase_cat_sfInterPro:PI3K_C2_domInterPro:PI3K_Vps34PIRSF:PIRSF000587InterPro:PI_Kinase
InterPro:PInositide-3_kin_accessory_domScanProsite:PS00915ScanProsite:PS00916PFscan:PS50290PFscan:PS51545PFscan:PS51547
PANTHER:PTHR10048PANTHER:PTHR10048:SF62SMART:SM00142SMART:SM00145SMART:SM00146SUPFAM:SSF48371
SUPFAM:SSF49562SUPFAM:SSF54452SUPFAM:SSF56112UniParc:UPI000233AA43SEG:seg:
Description
hypothetical protein
Coordinates
chr6:+:7609978..7619428
Molecular Weight (calculated)
93002.2 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.265
Length
812 amino acids
Sequence
(BLAST)
001: MTGNEFRFFL SCDISVPVTF RVERLEGNLP LPKSPDLENN APTDNRTTEL FVECALYIDG APFGLPMRTR LESLGPSYCW NELITLTTKY RDLTAQSQLT
101: FTVWDLSHGE GLIGGATILL FNNKKQLKTG KQKLRLWAGK EADGTFPTST PGKVPRHERG ELERLEKLVN KYERGQIQRV DWLDRLTFKT MERIKERESL
201: KNGSSHMYLV VDFCSFEHRV VFQESGANFL FPSPIASTND IVVVWDPEVG KINPSEHKQL KLARSLTRGV IDRDLKPSSN ERKSIQRILK YPPTRTLSGD
301: ERQLLWKFRF SLMSEKRALT KFLRCVEWSD VQEAKQALEL MGKWEMIDVC DALELLSPVF ESEEVRAYAV SVLERADDEE LQCYLLQLVQ ALRFERSAKS
401: RLSHFLIQCA LRNIELASFL RWYVAVELYD PAYAKRFYCT YEILEENMMK MAAGVNGEED GFKQWQSLVR QTELTAQLCS ITREVSNVRG NTQKKIEKLR
501: QLLSGLLSEL TYFDEPIRSP LAPGVLITGI VPSESSIFKS ALHPLRLTFR AANGGTCKII FKKGDDIRQD QLVVQMVSLM DRLLKLENLD LHLTPYKVLA
601: TGQDEGMLEF IPSRSLAQIL SENRSIISYL QKFHPDDHGP FGITATCLET FIKSCAGYSV ITYILGIGDR HLDNLLLRND GGLFHVDFGF ILGRDPKPFP
701: PPMKLCKEMV EAMGGAESQY YTRFKSYCCE AYNILRKSSN LILNLFYLMA GSNIPDIASD PEKGILKLQE KFRLDLDDEA SIHFFQDLIN ESVSALFPQM
801: VETIHRWAQY WR
Best Arabidopsis Sequence Match ( AT1G60490.1 )
(BLAST)
001: MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA
101: ITVWDVSCGK TEGLIGGATV LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ SIDWLDRLML KSLDTIKEQE
201: STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS
301: GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD
401: RSCLSQFLVQ RALQNIELAS FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC SITREVRNVR GNTQKKIEKL
501: RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV
601: LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP
701: FPPPMKLCKE MVEAMGGAES QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD EACIHFFQDL INESVSALFP
801: QMVETIHRWA QYWR
Arabidopsis Description
ATVPS34Phosphatidylinositol 3-kinase VPS34 [Source:UniProtKB/Swiss-Prot;Acc:P42339]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.