Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018290.1-P | Field mustard | cytosol, nucleus, plastid | 97.91 | 97.91 |
| CDY10760 | Canola | cytosol, nucleus, plastid | 83.77 | 92.49 |
| CDX97785 | Canola | cytosol, nucleus, plastid | 69.63 | 76.88 |
| CDY29631 | Canola | cytosol, nucleus, plastid | 69.63 | 76.88 |
| AT2G30930.1 | Thale cress | plastid | 55.5 | 64.63 |
| CDY06650 | Canola | cytosol | 30.89 | 50.86 |
| CDY10208 | Canola | cytosol | 30.37 | 49.57 |
| CDY29630 | Canola | nucleus | 28.8 | 47.01 |
Protein Annotations
| EnsemblPlants:CDY71789 | EnsemblPlantsGene:GSBRNA2T00020324001 | ProteinID:CDY71789 | ProteinID:CDY71789.1 | SEG:seg | UniParc:UPI0004EE248F |
| UniProt:A0A078JYP9 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng74510DBnaCnng74510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYP9]
Coordinates
chrLK047516:+:260..1319
Molecular Weight (calculated)
19607.6 Da
IEP (calculated)
4.479
GRAVY (calculated)
-0.208
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFLDKAAS TFNEAKESVT ATAESVGASL TEAQKTVAAS AETVTTSLTD AGENAAASAE TVKRSLTDAG ETVAASTETV KSEAAAAPEK VSNVSTQARE
101: VMDNVLSKGF EGLNTLLHGF EEKKTDISSK IVDVATKAVA GASSSTTVAS RDVPISTDNQ PLLAGERGAE TTPWWKNCCG VLDLLKTSTS K
101: VMDNVLSKGF EGLNTLLHGF EEKKTDISSK IVDVATKAVA GASSSTTVAS RDVPISTDNQ PLLAGERGAE TTPWWKNCCG VLDLLKTSTS K
001: MAQFLEKATS ALSEAKESVT STAESVTASL TDAEKTVNQT ARSTLTDAET TVAASVETVK TEAAAAPDKA SGVSTQAKDA VDKAFSRGIE GAKSLLQTFE
101: AKSSDISSKL VGGVTNLVSG ASSSTVANRD LPVSTDNQPL LASGEKTPWW KNCCGVLDLF KKDT
101: AKSSDISSKL VGGVTNLVSG ASSSTVANRD LPVSTDNQPL LASGEKTPWW KNCCGVLDLF KKDT
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80858]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.