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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004635_P002 Maize plasma membrane 84.97 88.17
HORVU4Hr1G012420.5 Barley plasma membrane 74.61 78.58
TraesCS4D01G073300.1 Wheat plasma membrane 73.83 76.72
TraesCS4A01G240200.1 Wheat plasma membrane 73.7 75.97
TraesCS4B01G074700.1 Wheat plasma membrane 73.06 75.7
Os11t0300600-01 Rice extracellular 51.55 71.45
Os11t0300700-01 Rice nucleus, plastid 13.73 64.63
EES15890 Sorghum plasma membrane 62.95 62.07
GSMUA_Achr1P13440_001 Banana plasma membrane 43.91 59.47
KRH00325 Soybean plasma membrane 51.68 56.52
KRH49459 Soybean plasma membrane 51.42 56.23
Bra004229.1-P Field mustard plasma membrane 51.68 55.73
CDX96089 Canola plasma membrane 51.55 55.59
VIT_01s0010g02910.t01 Wine grape plasma membrane 51.04 55.57
CDY01814 Canola plasma membrane 51.42 55.14
KRH65607 Soybean plasma membrane 50.65 54.99
PGSC0003DMT400038616 Potato mitochondrion 48.19 54.55
KRH76022 Soybean plasma membrane 50.13 54.43
AT1G67510.1 Thale cress plasma membrane 50.52 54.24
Solyc05g015150.2.1 Tomato plasma membrane 50.13 53.97
KXG25642 Sorghum plasma membrane 40.67 47.08
EES03041 Sorghum plasma membrane 38.47 41.71
GSMUA_Achr6P28540_001 Banana vacuole 34.59 41.14
TraesCS5A01G147300.1 Wheat mitochondrion 7.12 38.46
EER90087 Sorghum plasma membrane 34.84 31.03
EER98554 Sorghum plasma membrane 33.16 30.33
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.3Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8057059UniProt:C5WV40
EnsemblPlants:EER90640ProteinID:EER90640ProteinID:EER90640.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069
PFAM:PF00560PFAM:PF08263PFAM:PF13855PFscan:PS50011PANTHER:PTHR27008PANTHER:PTHR27008:SF9
InterPro:Prot_kinase_domSMART:SM00369EnsemblPlantsGene:SORBI_3001G037400SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0001A81FA1RefSeq:XP_002463642.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:+:2787774..2792855
Molecular Weight (calculated)
80477.0 Da
IEP (calculated)
7.404
GRAVY (calculated)
0.000
Length
772 amino acids
Sequence
(BLAST)
001: MSVLHSLGIL LLLLTAPAVV AALSADGLSL LAFKSAVTDD PSSALSSWSD ADADPCRWLG VTCVNTSSSS GDGGLRVVGV AIAGKNLSGY IPSELGSLAF
101: LRRLNLHGNR LSGTVPAALA NATALRSLFL YDNRLTGPFP AALCGIPKLQ NLDLSRNAFT GALPPELGRC KQLERLLLAE NEFSGNIPAA AAAAAASVSV
201: WQQMVRLQML DLSSNNLTGV IPKDLGKLSA LAGTLNLSHN HLSGGVPLEL GRLPATVTLD LRFNNLSGEI PQSGSLASQG PTAFLNNPGL CGFPLQVPCR
301: AAPPSSSSSS SSLPPPLSSG GGAGGARQPI KTSLIVLISV ADAVAVALVG AIAVYVYWKV CDRRRAAKED KGGDDDDDEE GRGLFPCPCC IRGDYACGDS
401: SSSSECSEHD GKCNGGGGGT EEGGELVAID KGFRMELDEL LRSSAYVLGK GGKGIVYKVV VDNGTTPVAV RRLGGGAAAP ERYREFAAEA GAIGRVRHPN
501: VVRLRAYYWS ADEKLVVTDF INNGNLATAL RGRSGQPTLS WTLRLRIAKG AARGLAHLHE CSPRRFVHGE VKPSNILLDA DYNALVADFG LTRLLTIAGC
601: TDVYSVAGSG GIMGGALPYA RPAAAVMDHK SSAYRAPEAR TLGGSQPPSQ KSDVYSFGVL LLELLTGKSP AEHAAPPSVS SSSSVPPSLP AGQNGQRELE
701: QLQAPELVRW VRQGFEDVRP LSELADATCL RDAAARKEVV AAFHVALGCV EADPERRPRM KAVSESLDKI GA
Best Arabidopsis Sequence Match ( AT1G67510.1 )
(BLAST)
001: MILLSLLLHL LLHLLNTSPS LSLSPDGIAL LSLKSAVDHS SSSAFSDWND NDTDPCHWSG ISCMNISDSS TSRVVGISLA GKHLRGYIPS ELGSLIYLRR
101: LNLHNNELYG SIPTQLFNAT SLHSIFLYGN NLSGTLPPSI CKLPKLQNLD LSMNSLSGTL SPDLNKCKQL QRLILSANNF SGEIPGDIWP ELTNLAQLDL
201: SANEFSGEIP KDIGELKSLS GTLNLSFNHL SGQIPNSLGN LPVTVSLDLR NNDFSGEIPQ SGSFSNQGPT AFLNNPKLCG FPLQKTCKDT DENSPGTRKS
301: PENNADSRRG LSTGLIVLIS VADAASVAFI GLVLVYLYWK KKDSEGGCSC TGNAKLGGGS VKGKSCCCIT GFPKEDDSEA EGNERGEGKG DGELVAIDKG
401: FSFELDELLR ASAYVLGKSG LGIVYKVVLG NGVPVAVRRL GEGGEQRYKE FVTEVQAMGK VKHPNVVKLR AYYWAPDEKL LISDFVNNGS LADALRGRNG
501: QPSPSLTWST RIKIAKGAAR GLAYLHECSP RKLVHGDVKP SNILLDSSFT PYISDFGLTR LITITAASAS SNEPSSSSAA GGFLGGALPY TSIKPSDRSN
601: GYKAPEARLP GGRPTQKWDV YSFGVVLMEL LTGKSPDSSP LSSSSTSTVV VEVPDLVKWV RKGFEEETPL SDMVDPMLLQ EVHAKQQVLS VFHLALACTE
701: GDPEVRPRMK NVSENIDKI
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:O64794]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.