Factsheet for TraesCS4D01G073300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G240200.1	Wheat	plasma membrane	96.5	95.73
HORVU4Hr1G012420.5	Barley	plasma membrane	93.14	94.41
TraesCS4B01G074700.1	Wheat	plasma membrane	94.21	93.96
Zm00001d004635_P002	Maize	plasma membrane	76.31	76.21
Os11t0300600-01	Rice	extracellular	56.39	75.22
EER90640	Sorghum	plasma membrane	76.72	73.83
Os11t0300700-01	Rice	nucleus, plastid	14.94	67.68
TraesCS2D01G443200.1	Wheat	plasma membrane	64.6	63.91
GSMUA_Achr1P13440_001	Banana	plasma membrane	44.68	58.25
KRH00325	Soybean	plasma membrane	54.1	56.94
KRH49459	Soybean	plasma membrane	53.7	56.52
Bra004229.1-P	Field mustard	plasma membrane	53.7	55.73
VIT_01s0010g02910.t01	Wine grape	plasma membrane	53.03	55.57
KRH65607	Soybean	plasma membrane	53.16	55.56
KRH76022	Soybean	plasma membrane	53.03	55.41
CDX96089	Canola	plasma membrane	53.3	55.31
CDY01814	Canola	plasma membrane	53.57	55.28
PGSC0003DMT400038616	Potato	mitochondrion	50.61	55.13
AT1G67510.1	Thale cress	plasma membrane	52.76	54.52
Solyc05g015150.2.1	Tomato	plasma membrane	52.36	54.25
TraesCS7D01G244000.1	Wheat	plasma membrane	40.51	46.38
GSMUA_Achr6P28540_001	Banana	vacuole	36.88	42.22
TraesCS1D01G240400.1	Wheat	plasma membrane, plastid	40.65	40.81
TraesCS5A01G147300.1	Wheat	mitochondrion	7.67	39.86
TraesCS5D01G165400.1	Wheat	plasma membrane	35.67	32.64
TraesCS7D01G512900.1	Wheat	plasma membrane	35.4	30.23

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF9	InterPro:Prot_kinase_dom
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G073300
EnsemblPlants:TraesCS4D01G073300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:47894540..47898718

Molecular Weight (calculated)

76993.0 Da

IEP (calculated)

8.115

GRAVY (calculated)

-0.066

Length

743 amino acids

Sequence
(BLAST)

001: MRSMLHSSLG ILLPALLLVL ATSPPAAPLS PDGVALLAFK SAVTDDPTSA LSAWSANDTD PCRWPGVACV NTSSSEARVA GVAVAGKNLS GHLPPELGSL
101: SLLRRLNLHG NRLSGAVPPA LSNATSLRSV FLYDNNLTGA FPASLCDLPR LQNLDLSKNA LAGPLPPALG RCRQLQRLLL ANNGFSGRIP AAALPHMESL
201: QLLDLSSNSL TGAIPPELGK LQALAGTLNV SRNRLSGAVP PELGRLPATV TLDLRFNNLS GEIPQSGSLA SQGPTAFLNN PGLCGFPLQV PCRAAPPSAS
301: SSTPPPTTTG SGGSAGGPSQ PMKTSLIVLI SVADAAGVAL IGVIVVYIYW KLRDRRGDSD GDDEEEEGRG LFACPCMRAN TCGDSLEGSD AGGDEKKRGG
401: GGGGGGGEDG ELVAIDKGFR MELDELLRSS AYVLGKGGKG IVYKVVVGNG TTPVAVRRLG GGTAAPERYK EFAAEAGAVG RVRHANVVRL RAYYWSPDEK
501: LVVTDFINNG NLASALRGRS GQPSLSWSLR LRIAKGAARG LAHLHECSPR RYVHGEVKPS NILLDADYNA LVSDFGLARL LTIAGCADSA GAGAGGIMGC
601: ALPYVKPPVP DRPNAYRAPE ARVPGSPPSQ KSDVYSFGVL LLELLTGRSP EQASPSGSSA SFSGPGAGAA EGQQAPEIVR WVRQGFEDAR PLSELADEAM
701: LRDAGARKEV VAAFHVALGC VEADLERRPR MKAVADSLDK IGS

Best Arabidopsis Sequence Match ( AT1G67510.1 )
(BLAST)

001: MILLSLLLHL LLHLLNTSPS LSLSPDGIAL LSLKSAVDHS SSSAFSDWND NDTDPCHWSG ISCMNISDSS TSRVVGISLA GKHLRGYIPS ELGSLIYLRR
101: LNLHNNELYG SIPTQLFNAT SLHSIFLYGN NLSGTLPPSI CKLPKLQNLD LSMNSLSGTL SPDLNKCKQL QRLILSANNF SGEIPGDIWP ELTNLAQLDL
201: SANEFSGEIP KDIGELKSLS GTLNLSFNHL SGQIPNSLGN LPVTVSLDLR NNDFSGEIPQ SGSFSNQGPT AFLNNPKLCG FPLQKTCKDT DENSPGTRKS
301: PENNADSRRG LSTGLIVLIS VADAASVAFI GLVLVYLYWK KKDSEGGCSC TGNAKLGGGS VKGKSCCCIT GFPKEDDSEA EGNERGEGKG DGELVAIDKG
401: FSFELDELLR ASAYVLGKSG LGIVYKVVLG NGVPVAVRRL GEGGEQRYKE FVTEVQAMGK VKHPNVVKLR AYYWAPDEKL LISDFVNNGS LADALRGRNG
501: QPSPSLTWST RIKIAKGAAR GLAYLHECSP RKLVHGDVKP SNILLDSSFT PYISDFGLTR LITITAASAS SNEPSSSSAA GGFLGGALPY TSIKPSDRSN
601: GYKAPEARLP GGRPTQKWDV YSFGVVLMEL LTGKSPDSSP LSSSSTSTVV VEVPDLVKWV RKGFEEETPL SDMVDPMLLQ EVHAKQQVLS VFHLALACTE
701: GDPEVRPRMK NVSENIDKI

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:O64794]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.