Factsheet for TraesCS4A01G240200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G073300.1	Wheat	plasma membrane	95.73	96.5
TraesCS4B01G074700.1	Wheat	plasma membrane	93.19	93.69
HORVU4Hr1G012420.5	Barley	plasma membrane	91.32	93.32
Zm00001d004635_P002	Maize	plasma membrane	75.3	75.81
Os11t0300600-01	Rice	extracellular	55.27	74.33
EER90640	Sorghum	plasma membrane	75.97	73.7
Os11t0300700-01	Rice	nucleus, plastid	14.82	67.68
TraesCS2A01G444000.2	Wheat	plasma membrane	65.02	64.76
GSMUA_Achr1P13440_001	Banana	plasma membrane	44.99	59.12
KRH49459	Soybean	plasma membrane	53.14	56.37
KRH00325	Soybean	plasma membrane	52.87	56.09
Bra004229.1-P	Field mustard	plasma membrane	53.0	55.45
KRH65607	Soybean	plasma membrane	52.6	55.41
VIT_01s0010g02910.t01	Wine grape	plasma membrane	52.34	55.29
KRH76022	Soybean	plasma membrane	52.47	55.27
CDX96089	Canola	plasma membrane	52.6	55.03
CDY01814	Canola	plasma membrane	52.87	55.0
PGSC0003DMT400038616	Potato	mitochondrion	49.93	54.84
AT1G67510.1	Thale cress	plasma membrane	51.8	53.96
Solyc05g015150.2.1	Tomato	plasma membrane	51.54	53.84
TraesCS7A01G245400.1	Wheat	plasma membrane	40.85	47.15
GSMUA_Achr6P28540_001	Banana	vacuole	36.58	42.22
TraesCS1A01G240300.1	Wheat	plasma membrane	39.12	41.92
TraesCS5A01G147300.1	Wheat	mitochondrion	7.61	39.86
TraesCS5A01G160500.1	Wheat	plasma membrane	34.18	31.45
TraesCS7A01G523900.1	Wheat	plasma membrane	35.78	30.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.3	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR27008	PANTHER:PTHR27008:SF9	InterPro:Prot_kinase_dom
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G240200
EnsemblPlants:TraesCS4A01G240200.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:549816755..549820868

Molecular Weight (calculated)

77460.6 Da

IEP (calculated)

8.683

GRAVY (calculated)

-0.062

Length

749 amino acids

Sequence
(BLAST)

001: MRSLPHSSLG ILLLPALLLV LAASPPAAPL SPDGLALLAF KAAVTDDPTS ALSAWSANDT DPCRWPGVAC VNTSSTEARV AGLAVAGKNL SGRLPPELGS
101: LSLLRRLNLH GNRLSGAVPP ALSNATSLRS VFLYDNNLTG AFPAFLCDLP RLQNLDLSKN ALAGPLPPAL GRCRQLQRLL LANNGFSGRI PAATLPQMKS
201: LQLLDLSSNS LTGAIPPELG KLQALAGTLN VSRNRLSGAV PPELGRLPAT VTLDLRFNNL SGEIPQSGSL ASQGPTAFLN NPGLCGFSLQ VPCRAAPPSA
301: SSSTPPPTTT GSGGSAGGGP SQPMKTSLIV LISVADAAGV ALIGVIVVYI YWKLRDRRGD GGGDDEDEEG RGLFFCPCMR ANTCGDSSEG SDAGGDGEKK
401: RGNGSGGGGG GGEDGELVAI DKGFRMELDE LLRSSAYVLG KGGKGIVYKV VVGNGTTPVA VRRLGGGTAA PERYKEFAAE AGAVGRVRHA NVVRLRAYYW
501: SPDEKLVVTD FINNGNLASA LRGRSGQPSL SWSLRLRIAK GAARGLAHLH ECSPRRYVHG EVKPSNILLD ADYNALVSDF GLARLLTIAG CADAAGAGAG
601: GIMGCALPYV KPPAPDRPNA YRAPEARVPG SRPSQKSDVY SFGVLLLELL TGRSPEQASP SGSSASFSGP GAAAAAEGQQ APEIVRWVRQ GFDDARPLSE
701: LADDAVLRDA GARKEVVAAF HVALGCVEAD LERRPRMKAV ADSLDKIGS

Best Arabidopsis Sequence Match ( AT1G25320.1 )
(BLAST)

001: MSVGSLLFMF LLIWNFNGEL NALNDEGFAL LTLKQSISKD PDGSLSNWNS ENQNPCSWNG VTCDDNKVVV SLSIPKKKLL GYLPSSLGLL SNLRHLNLRS
101: NELSGNLPVE LFKAQGLQSL VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP SGFGQSLASL QKLDLSSNNL
201: IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN
301: EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL
401: DELLKASAFV LGKGGNGIVY KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY IPNGSLTNAL HGNPGMVSFK
501: PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV
601: KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC
701: LQ

Arabidopsis Description

At1g25320/F4F7_17 [Source:UniProtKB/TrEMBL;Acc:Q9FRI1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.