Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029777_P001 | Maize | endoplasmic reticulum, plasma membrane | 92.12 | 90.75 |
| GSMUA_Achr11P... | Banana | extracellular | 61.21 | 72.66 |
| GSMUA_Achr8P13400_001 | Banana | extracellular | 60.61 | 71.94 |
| EER87789 | Sorghum | golgi, vacuole | 56.67 | 54.84 |
| EER99411 | Sorghum | vacuole | 55.15 | 53.22 |
| EER88094 | Sorghum | endoplasmic reticulum, vacuole | 37.58 | 36.69 |
| EES05498 | Sorghum | endoplasmic reticulum, vacuole | 34.24 | 36.45 |
| EES05496 | Sorghum | golgi, vacuole | 36.06 | 36.06 |
| EES07217 | Sorghum | endoplasmic reticulum, extracellular | 33.33 | 35.37 |
| OQU81032 | Sorghum | extracellular | 32.73 | 34.18 |
| KXG19617 | Sorghum | golgi, mitochondrion, vacuole | 33.64 | 33.84 |
| KXG30713 | Sorghum | golgi, vacuole | 32.42 | 33.44 |
| EER89439 | Sorghum | extracellular | 34.85 | 32.58 |
| OQU91894 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 35.15 | 30.93 |
Protein Annotations
| EnsemblPlants:EER94575 | EnsemblPlantsGene:SORBI_3001G311800 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF36 | PFAM:PF04674 |
| ProteinID:EER94575 | ProteinID:EER94575.1 | RefSeq:XP_002467577.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0001A83039 | UniProt:C5WTK4 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:59857179..59858182
Molecular Weight (calculated)
34878.6 Da
IEP (calculated)
6.660
GRAVY (calculated)
0.081
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAAAIVFL LPGLLVPAMA ATPYPYGRGG GDPLVGASKR YEGSSDLVDL RYHMGPVLSA APLRLYVLWY GRWDPAHQAP VRDFLLSLSD PSPPQPSVAD
101: WWATAALYAD QTLANVTRRV ALAGEAADES ASLGRSLSRL DIQCVLASAV AAGRLPADAR GGAYLVLTAP GVGVQDFCRA VCGFHYFTFP SLVGHTLPYA
201: WRRPLRDVCA YPFALPSYMS RTGMAALRPP NGDAGVDGMV SVIAHELAEL ATNPLVNAWY AGEDPTAPTE IADLCEGVYG TGGGGGYAGK VAVDAQGRSW
301: NVNGRKGRKF LVQWLWSPEA KACVGPNASD
101: WWATAALYAD QTLANVTRRV ALAGEAADES ASLGRSLSRL DIQCVLASAV AAGRLPADAR GGAYLVLTAP GVGVQDFCRA VCGFHYFTFP SLVGHTLPYA
201: WRRPLRDVCA YPFALPSYMS RTGMAALRPP NGDAGVDGMV SVIAHELAEL ATNPLVNAWY AGEDPTAPTE IADLCEGVYG TGGGGGYAGK VAVDAQGRSW
301: NVNGRKGRKF LVQWLWSPEA KACVGPNASD
001: MSSPATTITF FFFFTLSSFF YITSSLQNNN NNKHTATVNS LNIPSAAAEI TLVNPKLPPR SLSLTSSKKF EGSSNLVHLR YHMGPVLSSS PINIYVIWYG
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
101: QWSRPHKSLI RDFLNSISDA KAPSPSVSEW WRTASLYTDQ TGSNVSRSVL IAGEYSDSKY SHGQHLTRLT IQEVIASAAR SASFPVDHKN GMYLVLTSHD
201: VTMQDFCRAV CGFHYFTFPS MVGYTMPYAW VGQSGKQCPE VCAYPFALPG YMGHGGPGEL RPPNGETGVD GMVSVIGHEL AEVVSNPLIN AWYAGEDPTA
301: PTEIGDLCEG LYGSGGGGGY IGQVMRDREG KTFNMNGKGG RKFLVQWIWN PNLKACSGPN SVD
Arabidopsis Description
EXL5Protein EXORDIUM-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII5]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.