CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014318_P001	Maize	extracellular, plasma membrane	79.47	90.58
TraesCS5B01G052300.1	Wheat	vacuole	60.8	70.81
HORVU5Hr1G011440.2	Barley	endoplasmic reticulum, plasma membrane	59.2	70.48
TraesCS5A01G047700.1	Wheat	vacuole	61.07	70.46
TraesCS5A01G047400.1	Wheat	vacuole	61.07	70.46
Os10t0376400-00	Rice	extracellular, plasma membrane	62.67	70.36
TraesCS5D01G058000.1	Wheat	extracellular	60.53	69.85
GSMUA_Achr8P17620_001	Banana	endoplasmic reticulum, extracellular	35.2	50.77
EES07217	Sorghum	endoplasmic reticulum, extracellular	40.53	48.87
VIT_18s0001g06140.t01	Wine grape	endoplasmic reticulum, plasma membrane	40.27	47.78
OQU81032	Sorghum	extracellular	39.73	47.15
EES05498	Sorghum	endoplasmic reticulum, vacuole	38.93	47.1
PGSC0003DMT400079205	Potato	endoplasmic reticulum, vacuole	38.67	46.93
EER88094	Sorghum	endoplasmic reticulum, vacuole	41.87	46.45
Solyc04g074400.1.1	Tomato	nucleus	38.13	46.28
EES05496	Sorghum	golgi, vacuole	40.0	45.45
KXG19617	Sorghum	golgi, mitochondrion, vacuole	39.47	45.12
KXG30713	Sorghum	golgi, vacuole	37.87	44.38
EER89439	Sorghum	extracellular	38.13	40.51
EER94575	Sorghum	endoplasmic reticulum, plasma membrane	30.93	35.15
EER87789	Sorghum	golgi, vacuole	28.8	31.67
EER99411	Sorghum	vacuole	28.53	31.29

Protein Annotations

EnsemblPlants:OQU91894	EnsemblPlantsGene:SORBI_3001G261460	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:EXORDIUM-like
PANTHER:PTHR31279	PANTHER:PTHR31279:SF10	PFAM:PF04674	ProteinID:OQU91894	ProteinID:OQU91894.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B8B997F	UniProt:A0A1Z5S7K6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr1:-:34603865..34605331

Molecular Weight (calculated)

39741.8 Da

IEP (calculated)

9.247

GRAVY (calculated)

-0.049

Length

375 amino acids

Sequence
(BLAST)

001: MPLELESEPR ARDMYYYIAA SQPCVALRCM VCKRNSVRKT DRRRRNHMDR ATSNVGCGAV ALLVLVLVSF ARPCHSSLYR PPPPVMVYHA GEVLDGVVPV
101: SVLYYGAFSP HQKAIISDFL LSLSPRGRQP QHHRFGAPGP APAPSVARWW ETVDRYVRKA GRGPPRVLLA SQVHDESCSL GKTLSRVQVE RLASRLGVAP
201: RGVAVVLTAA DVAVEGQCGS ACGTHGASAS GGATHVWVGD AAVQCPGRCT WPFHPAEGFA YGARHVPGRG RGETLRAPNG DVGIDGMLIN LAALLAAAVT
301: NPYGHGYFQG DPGAPVEVAA ACPGVYGRGA YPGYPGAVRL DTATGAGFNV VGRNGRKYLV PALVDPDTNS CIIMT

Best Arabidopsis Sequence Match ( AT1G35140.1 )
(BLAST)

001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF

Arabidopsis Description

EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.