Factsheet for TraesCS5A01G047400.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G047700.1	Wheat	vacuole	98.46	98.46
TraesCS5B01G052300.1	Wheat	vacuole	96.31	97.2
TraesCS5D01G058000.1	Wheat	extracellular	96.92	96.92
HORVU5Hr1G011440.2	Barley	endoplasmic reticulum, plasma membrane	88.92	91.75
Zm00001d014318_P001	Maize	extracellular, plasma membrane	72.0	71.12
Os10t0376400-00	Rice	extracellular, plasma membrane	71.08	69.16
OQU91894	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	70.46	61.07
GSMUA_Achr8P17620_001	Banana	endoplasmic reticulum, extracellular	39.69	49.62
TraesCS6A01G316800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.77	48.25
TraesCS6A01G316700.1	Wheat	endoplasmic reticulum	47.38	47.98
TraesCS6A01G316900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.23	47.42
VIT_18s0001g06140.t01	Wine grape	endoplasmic reticulum, plasma membrane	44.62	45.89
TraesCS7A01G178400.1	Wheat	extracellular	44.92	45.62
TraesCS7A01G178500.1	Wheat	extracellular	45.23	45.51
TraesCS7A01G178200.1	Wheat	endoplasmic reticulum, vacuole	44.62	45.45
TraesCS6A01G316600.1	Wheat	endoplasmic reticulum, extracellular	42.46	44.37
PGSC0003DMT400079205	Potato	endoplasmic reticulum, vacuole	42.15	44.34
Solyc04g074400.1.1	Tomato	nucleus	42.15	44.34
TraesCS2A01G212700.1	Wheat	extracellular	34.77	34.14
TraesCS4A01G417000.1	Wheat	golgi	33.85	31.79
TraesCS7A01G071600.1	Wheat	vacuole	33.54	31.59

Protein Annotations

EnsemblPlants:TraesCS5A01G047400.1	EnsemblPlantsGene:TraesCS5A01G047400	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF10	PFAM:PF04674
SEG:seg	SignalP:SignalP-noTM	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5A:-:42695390..42696367

Molecular Weight (calculated)

33166.6 Da

IEP (calculated)

8.162

GRAVY (calculated)

0.114

Length

325 amino acids

Sequence
(BLAST)

001: MTMSKPHAAC SLLLALLIGL TRPSPCASSL YNPPPPDMAY HHGGVLDGTV PVSVLYYGAF SPHHKAVLAD FLLSLSPRSP PHAFGAPAAA SSASVAQWWE
101: TVDRYVQRTG RERTRVMLTN QVSDEGCSLG KHLSRLQVEQ LAARLGVAPG GVAVVLTAAN VAVDGFCGSS CGLHGSLAPG GAVHVWVGNA AVQCPGRCAW
201: PFHAADPAAA ATAGPGRHRG GETPLRAPNG DAGVDGMVIN LAALLAGAVT NPYGHGYFQG DAGAPVEVGG GCPGVYGRGA YPGYPGAVKL DTATGGGYNV
301: VGRNGRRYLV PALLDPANYS CLIMA

Best Arabidopsis Sequence Match ( AT1G35140.1 )
(BLAST)

001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF

Arabidopsis Description

EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.