Factsheet for TraesCS4A01G417000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G071600.1	Wheat	vacuole	97.98	98.26
TraesCS7D01G067100.1	Wheat	vacuole	95.66	95.66
HORVU4Hr1G033560.1	Barley	cytosol, extracellular	19.36	88.16
HORVU3Hr1G007150.2	Barley	extracellular	39.02	86.54
EER87789	Sorghum	golgi, vacuole	81.79	82.99
Os06t0133600-01	Rice	golgi, vacuole	82.95	82.47
Zm00001d045458_P001	Maize	endoplasmic reticulum, extracellular	80.92	82.35
HORVU7Hr1G014410.3	Barley	plastid	91.91	71.46
GSMUA_Achr1P16640_001	Banana	vacuole	66.19	68.98
PGSC0003DMT400038389	Potato	cytosol	18.21	62.38
Bra022553.1-P	Field mustard	vacuole	58.96	60.53
CDX91593	Canola	vacuole	58.96	60.53
CDY46938	Canola	vacuole	58.96	60.53
AT5G51550.1	Thale cress	extracellular, vacuole	58.67	60.24
PGSC0003DMT400059235	Potato	endoplasmic reticulum, plasma membrane	60.69	60.17
KRH23788	Soybean	nucleus	60.4	60.06
VIT_16s0022g01430.t01	Wine grape	extracellular, golgi	60.12	59.77
Solyc03g083560.1.1	Tomato	nucleus	60.12	59.6
KRH40006	Soybean	nucleus	59.83	59.48
PGSC0003DMT400072046	Potato	extracellular, vacuole	56.94	56.77
PGSC0003DMT400072047	Potato	extracellular, vacuole	56.94	56.77
Solyc06g034390.1.1	Tomato	nucleus	56.65	56.65
TraesCS2A01G212700.1	Wheat	extracellular	49.13	51.36
PGSC0003DMT400089791	Potato	cytosol	16.47	41.61
PGSC0003DMT400095305	Potato	cytosol	14.74	41.46
TraesCS6A01G316700.1	Wheat	endoplasmic reticulum	33.53	36.14
TraesCS6A01G316900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.5	35.16
TraesCS7A01G178200.1	Wheat	endoplasmic reticulum, vacuole	32.37	35.11
TraesCS7A01G178500.1	Wheat	extracellular	32.66	34.98
TraesCS7A01G178400.1	Wheat	extracellular	31.79	34.38
TraesCS6A01G316800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.21	34.29
TraesCS6A01G316600.1	Wheat	endoplasmic reticulum, extracellular	30.64	34.08
TraesCS5A01G047700.1	Wheat	vacuole	31.79	33.85
TraesCS5A01G047400.1	Wheat	vacuole	31.79	33.85

Protein Annotations

EnsemblPlants:TraesCS4A01G417000.1	EnsemblPlantsGene:TraesCS4A01G417000	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF7	PFAM:PF04674
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:+:686529432..686530472

Molecular Weight (calculated)

36910.8 Da

IEP (calculated)

7.428

GRAVY (calculated)

-0.027

Length

346 amino acids

Sequence
(BLAST)

001: MPHRGAVLVF LLALAAAPLA AVAWRPWPPR VASGALAGLG ASKKFEGSSN FVKLEYHMGP VLAADITVHP IWYGAWPADQ KRTIRAFLRS LSPQASGEKE
101: GAVPSPSVAD WWRTVRLYTD QTTANVSAVV ALGQEKCDAR MSRGASLSRM DIQSVVKDAV TARTRPLPVD AGGVYLVLTS PEVRVENFCG QVCGFHYFTF
201: PSVVGYTLPY AWVGNSAGRC PEVCAYPFAI PAYVPGRRPE APPNGDAGVD GMVSVIAHEL AEMASNPLAN AWYAGGDPSF PTEIADLCEG IYGTGGGGAY
301: TGQLLTDGRS GASYNLNGVG GRRFLVQWVW DPYRSYCSGP NALDQH

Best Arabidopsis Sequence Match ( AT5G51550.1 )
(BLAST)

001: MHSLPVNLVL TVLTVFLTSP AQVIGYRPYP PKTNGSDQIF DASKKFEGSS NLVRLRYHMG PVLTNNITVH PIWYGTWQKS QKKIIREFIN SISAVGSKHP
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD

Arabidopsis Description

EXL3Protein EXORDIUM-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.