CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23788	Soybean	nucleus	94.54	94.54
AT5G51550.1	Thale cress	extracellular, vacuole	73.28	75.67
VIT_16s0022g01430.t01	Wine grape	extracellular, golgi	75.57	75.57
Bra022553.1-P	Field mustard	vacuole	72.99	75.37
CDY46938	Canola	vacuole	72.99	75.37
CDX91593	Canola	vacuole	72.99	75.37
Solyc03g083560.1.1	Tomato	nucleus	72.7	72.49
PGSC0003DMT400059235	Potato	endoplasmic reticulum, plasma membrane	72.7	72.49
PGSC0003DMT400072047	Potato	extracellular, vacuole	70.98	71.18
PGSC0003DMT400072046	Potato	extracellular, vacuole	70.98	71.18
Solyc06g034390.1.1	Tomato	nucleus	69.83	70.23
PGSC0003DMT400038389	Potato	cytosol	19.83	68.32
HORVU4Hr1G033560.1	Barley	cytosol, extracellular	14.66	67.11
GSMUA_Achr1P16640_001	Banana	vacuole	61.78	64.76
EER87789	Sorghum	golgi, vacuole	61.49	62.76
HORVU3Hr1G007150.2	Barley	extracellular	27.87	62.18
Zm00001d045458_P001	Maize	endoplasmic reticulum, extracellular	60.34	61.76
Os06t0133600-01	Rice	golgi, vacuole	60.92	60.92
TraesCS7D01G067100.1	Wheat	vacuole	60.06	60.4
TraesCS4A01G417000.1	Wheat	golgi	59.48	59.83
TraesCS7A01G071600.1	Wheat	vacuole	59.2	59.71
KRG92438	Soybean	nucleus	57.18	58.19
KRH65072	Soybean	cytosol	19.25	54.92
KRH34361	Soybean	nucleus	57.47	52.08
HORVU7Hr1G014410.3	Barley	plastid	61.78	48.31
PGSC0003DMT400089791	Potato	cytosol	18.39	46.72
PGSC0003DMT400095305	Potato	cytosol	15.52	43.9
KRH53040	Soybean	nucleus	33.33	37.66
KRH72379	Soybean	extracellular, vacuole	33.62	37.03
KRH18203	Soybean	nucleus	32.18	36.96
KRH43888	Soybean	extracellular	31.32	36.95
KRH16767	Soybean	extracellular, vacuole	33.33	36.71
KRH16766	Soybean	nucleus	32.47	35.99
KRH42138	Soybean	nucleus	31.32	35.86
KRH72378	Soybean	nucleus	32.18	35.78
KRH10561	Soybean	extracellular	30.46	35.69
KRH16765	Soybean	nucleus	31.61	35.14
KRH62322	Soybean	nucleus	31.61	34.92
KRH53041	Soybean	nucleus	32.47	34.88
KRH53039	Soybean	extracellular	31.32	34.17
KRH62323	Soybean	plastid	32.76	32.02
KRH62324	Soybean	nucleus	31.9	29.37
KRH60707	Soybean	plasma membrane, vacuole	22.99	27.12
KRH51406	Soybean	plasma membrane, vacuole	22.99	26.58

Protein Annotations

EMBL:ACUP02006014	EnsemblPlants:KRH40006	EnsemblPlantsGene:GLYMA_09G232700	EntrezGene:100778428	InterPro:EXORDIUM-like	PANTHER:PTHR31279
PANTHER:PTHR31279:SF7	PFAM:PF04674	ProteinID:KRH40006	ProteinID:KRH40006.1	SEG:seg	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000233831F	UniProt:I1L5R7	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr9:-:45580041..45581994

Molecular Weight (calculated)

38453.8 Da

IEP (calculated)

8.667

GRAVY (calculated)

-0.155

Length

348 amino acids

Sequence
(BLAST)

001: MCQGLSAPSP PCSALLSFTL LLLLLSVVGP VSAWRPWPQS NKMNISDYAF GDSKKYEGSS EFVKLRYHMG PVLTTNITVH TIWYGKWERS QKKIIREFIN
101: SISAANSPHP SVAGWWRTVQ LYTDQTGANI SKSVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAITGKTRP LPINPRSGLY LLLTADDVYV QDFCTSVCGF
201: HYFTFPSLVG YTLPYAWVGN SAKFCPGQCA YPFSVPAYIP NRKPFKSPNG DVGVDGMISV IGHEMAELAT NPLANAWYAG QDPSFPVEIA DLCEGIYGTG
301: GGGSYTGQVF DARDGATYNM NGIRRKFLVQ WLWSHVLNYC TGPNALDH

Best Arabidopsis Sequence Match ( AT5G51550.1 )
(BLAST)

001: MHSLPVNLVL TVLTVFLTSP AQVIGYRPYP PKTNGSDQIF DASKKFEGSS NLVRLRYHMG PVLTNNITVH PIWYGTWQKS QKKIIREFIN SISAVGSKHP
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD

Arabidopsis Description

EXL3Protein EXORDIUM-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.