Factsheet for PGSC0003DMT400089791

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038389	Potato	cytosol	54.01	73.27
PGSC0003DMT400095305	Potato	cytosol	64.96	72.36
HORVU4Hr1G033560.1	Barley	cytosol, extracellular	22.63	40.79
HORVU3Hr1G007150.2	Barley	extracellular	41.61	36.54
PGSC0003DMT400059235	Potato	endoplasmic reticulum, plasma membrane	54.74	21.49
PGSC0003DMT400072047	Potato	extracellular, vacuole	51.82	20.46
PGSC0003DMT400072046	Potato	extracellular, vacuole	51.82	20.46
AT5G51550.1	Thale cress	extracellular, vacuole	48.18	19.58
Bra022553.1-P	Field mustard	vacuole	47.45	19.29
CDX91593	Canola	vacuole	47.45	19.29
CDY46938	Canola	vacuole	47.45	19.29
KRH23788	Soybean	nucleus	47.45	18.68
VIT_16s0022g01430.t01	Wine grape	extracellular, golgi	47.45	18.68
KRH40006	Soybean	nucleus	46.72	18.39
Os06t0133600-01	Rice	golgi, vacuole	43.07	16.95
Zm00001d045458_P001	Maize	endoplasmic reticulum, extracellular	41.61	16.76
EER87789	Sorghum	golgi, vacuole	41.61	16.72
TraesCS7A01G071600.1	Wheat	vacuole	41.61	16.52
PGSC0003DMT400043340	Potato	extracellular	42.34	16.48
TraesCS7D01G067100.1	Wheat	vacuole	41.61	16.47
TraesCS4A01G417000.1	Wheat	golgi	41.61	16.47
GSMUA_Achr1P16640_001	Banana	vacuole	39.42	16.27
PGSC0003DMT400093900	Potato	mitochondrion	36.5	14.79
HORVU7Hr1G014410.3	Barley	plastid	41.61	12.81
PGSC0003DMT400079205	Potato	endoplasmic reticulum, vacuole	25.55	11.33
PGSC0003DMT400032756	Potato	extracellular	24.82	11.3
PGSC0003DMT400079158	Potato	endoplasmic reticulum, vacuole	24.82	10.93
PGSC0003DMT400079157	Potato	endoplasmic reticulum, vacuole	24.82	10.9
PGSC0003DMT400079209	Potato	extracellular	24.82	10.86
PGSC0003DMT400079208	Potato	endoplasmic reticulum, vacuole	24.82	10.69
PGSC0003DMT400079207	Potato	endoplasmic reticulum, vacuole	24.82	10.69
PGSC0003DMT400079206	Potato	endoplasmic reticulum, extracellular	24.82	10.69
PGSC0003DMT400079159	Potato	vacuole	24.82	10.56
PGSC0003DMT400079160	Potato	extracellular, golgi	23.36	10.36

Protein Annotations

EnsemblPlants:PGSC0003DMT400089791	EnsemblPlantsGene:PGSC0003DMG400039362	InterPro:EXORDIUM-like	PANTHER:PTHR31279	PANTHER:PTHR31279:SF7	PFAM:PF04674
PGSC:PGSC0003DMG400039362	SEG:seg	UniParc:UPI0002963DD0	UniProt:M1DIX8	MapMan:35.1	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400039362]

Coordinates

chr4:-:60960444..60960857

Molecular Weight (calculated)

14453.0 Da

IEP (calculated)

5.506

GRAVY (calculated)

-0.323

Length

137 amino acids

Sequence
(BLAST)

001: MPGFQSYESP NNDVGVYEMI SAITHEIAEV STNPLVNAWY AGQVPSFPIE IADLCEGIYG TSGGRSYTGQ MLNGEDGATY NMNGVRDANG AGRGGCGANP
101: HRPANILTCP APPHIAKKCV FNPPRPSPQV PALLHPT

Best Arabidopsis Sequence Match ( AT5G51550.1 )
(BLAST)

001: MHSLPVNLVL TVLTVFLTSP AQVIGYRPYP PKTNGSDQIF DASKKFEGSS NLVRLRYHMG PVLTNNITVH PIWYGTWQKS QKKIIREFIN SISAVGSKHP
101: SVSGWWKTVQ LYTDQTGSNI TGTVRLGEEK NDRFYSHGKS LTRLSIQSVI KSAVTSRSRP LPVNPKSGLY LLLTADDVYV QDFCGQVCGF HYFTFPSIVG
201: FTLPYAWVGN SAKLCPGVCA YPFAVPAFIP GLKPVKSPNG DVGVDGMISV IAHEIAELAT NPLVNAWYAG PDPVAPVEIA DLCEGIYGTG GGGSYTGQML
301: NDHSGATYNV NGIRRRYLIQ WLWSHVVSYC TGPNALD

Arabidopsis Description

EXL3Protein EXORDIUM-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.