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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 94.65 96.47
Solyc04g074410.1.1 Tomato nucleus 94.03 95.83
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 95.6 95.6
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 93.71 93.71
Solyc04g074440.1.1 Tomato nucleus 92.77 93.65
PGSC0003DMT400079209 Potato extracellular 92.14 93.61
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 90.88 92.93
VIT_18s0001g06150.t01 Wine grape vacuole 76.1 75.86
KRH16765 Soybean nucleus 72.64 73.8
KRH53041 Soybean nucleus 71.7 70.37
CDX90701 Canola endoplasmic reticulum, vacuole 68.24 69.77
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 68.87 69.75
AT4G08950.1 Thale cress extracellular, vacuole 68.87 69.75
CDY05033 Canola endoplasmic reticulum, vacuole 68.24 69.11
GSMUA_Achr10P... Banana cytosol, extracellular, plastid 45.28 66.36
PGSC0003DMT400079159 Potato vacuole 66.98 66.15
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 45.6 62.77
KRH62324 Soybean nucleus 72.33 60.85
Os02t0757100-01 Rice extracellular 59.12 60.45
EES07217 Sorghum endoplasmic reticulum, extracellular 57.86 59.16
GSMUA_Achr7P12680_001 Banana endoplasmic reticulum, extracellular 47.8 59.14
PGSC0003DMT400032756 Potato extracellular 55.97 59.14
HORVU6Hr1G077750.1 Barley endoplasmic reticulum, extracellular 58.18 58.73
TraesCS6A01G316600.1 Wheat endoplasmic reticulum, extracellular 57.23 58.52
Zm00001d018107_P001 Maize endoplasmic reticulum, extracellular 57.55 58.28
TraesCS6B01G347100.1 Wheat endoplasmic reticulum, extracellular 56.29 57.93
Zm00001d052205_P001 Maize extracellular 57.23 57.78
TraesCS6D01G296100.1 Wheat endoplasmic reticulum, extracellular 56.29 57.56
GSMUA_Achr7P12690_001 Banana extracellular 37.42 57.21
Os06t0220000-01 Rice extracellular 49.69 55.83
Os02t0756200-02 Rice extracellular 53.46 55.19
TraesCSU01G264500.1 Wheat plastid 50.0 54.83
HORVU6Hr1G077790.1 Barley endoplasmic reticulum, extracellular 53.14 54.52
PGSC0003DMT400079160 Potato extracellular, golgi 52.83 54.37
PGSC0003DMT400079205 Potato endoplasmic reticulum, vacuole 52.52 54.05
TraesCS6D01G296400.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.83 54.02
TraesCS6A01G316900.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.2 53.55
TraesCS6B01G347400.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.2 53.55
TraesCS7D01G180600.1 Wheat extracellular 53.46 52.96
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 43.08 52.69
HORVU6Hr1G077780.1 Barley endoplasmic reticulum, extracellular 51.57 52.06
TraesCS7B01G084300.1 Wheat extracellular, golgi 52.83 52.01
TraesCS7A01G178500.1 Wheat extracellular 52.52 51.7
TraesCS7A01G178400.1 Wheat extracellular 51.89 51.56
TraesCS7D01G180300.1 Wheat extracellular 51.89 51.56
EES05496 Sorghum golgi, vacuole 53.46 51.52
TraesCS6A01G316800.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.94 51.43
TraesCS6D01G296300.1 Wheat extracellular, plasma membrane 50.94 51.43
TraesCS7B01G084100.1 Wheat extracellular 52.2 51.39
EES05498 Sorghum endoplasmic reticulum, vacuole 50.0 51.29
TraesCS6B01G347200.1 Wheat endoplasmic reticulum, extracellular, vacuole 51.26 51.26
TraesCS7D01G180400.1 Wheat extracellular 51.57 51.25
Os02t0756600-01 Rice extracellular 50.31 51.12
TraesCS6B01G347300.1 Wheat endoplasmic reticulum, extracellular 50.31 50.79
TraesCS6A01G316700.1 Wheat endoplasmic reticulum 51.26 50.78
TraesCS6D01G296200.1 Wheat endoplasmic reticulum 51.26 50.46
Zm00001d044864_P001 Maize mitochondrion 51.26 49.7
Zm00001d052206_P001 Maize plastid 50.63 49.54
Os06t0220200-00 Rice endoplasmic reticulum, extracellular, vacuole 50.0 49.53
EER88094 Sorghum endoplasmic reticulum, vacuole 52.2 49.11
Os02t0756800-01 Rice extracellular 50.63 49.09
TraesCS7D01G180500.1 Wheat extracellular 47.8 48.56
Zm00001d018105_P001 Maize extracellular 47.17 47.62
Zm00001d037205_P001 Maize extracellular 50.0 47.32
KXG30713 Sorghum golgi, vacuole 47.17 46.88
Os06t0220300-00 Rice extracellular 45.91 46.2
EER89439 Sorghum extracellular 50.63 45.61
GSMUA_Achr7P12670_001 Banana endoplasmic reticulum, extracellular 15.41 43.75
HORVU6Hr1G077770.1 Barley mitochondrion, plastid 51.57 39.52
PGSC0003DMT400038389 Potato cytosol 11.01 34.65
PGSC0003DMT400093900 Potato mitochondrion 34.59 32.54
GSMUA_Achr6P30430_001 Banana endoplasmic reticulum 26.42 32.18
PGSC0003DMT400043340 Potato extracellular 34.91 31.53
PGSC0003DMT400059235 Potato endoplasmic reticulum, plasma membrane 34.59 31.52
PGSC0003DMT400072047 Potato extracellular, vacuole 33.02 30.26
PGSC0003DMT400072046 Potato extracellular, vacuole 33.02 30.26
Zm00001d018106_P001 Maize plastid 46.86 25.0
PGSC0003DMT400089791 Potato cytosol 10.69 24.82
HORVU7Hr1G036780.8 Barley golgi 26.73 24.15
HORVU6Hr1G077820.1 Barley endoplasmic reticulum 14.15 22.84
PGSC0003DMT400095305 Potato cytosol 7.86 20.33
Protein Annotations
EnsemblPlants:PGSC0003DMT400079208EnsemblPlantsGene:PGSC0003DMG400030828EntrezGene:102580035EntrezGene:102580361InterPro:EXORDIUM-likePANTHER:PTHR31279
PANTHER:PTHR31279:SF3PFAM:PF04674PGSC:PGSC0003DMG400030828RefSeq:XP_006363274.1RefSeq:XP_006363275.1SignalP:SignalP-TM
UniParc:UPI0002950517UniProt:M1D1F0MapMan:35.1:::
Description
Phi-1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030828]
Coordinates
chr4:-:63960228..63961400
Molecular Weight (calculated)
34121.5 Da
IEP (calculated)
8.914
GRAVY (calculated)
-0.057
Length
318 amino acids
Sequence
(BLAST)
001: MSSFSSNSTH FILKIFLVIS FFNVCFASRK LTALVQDPQM QLLNYHKGAL LSGKISVNLI WYGKFKPSQR AIVSDFITSL SSSTPSKTNP SVAQWWKTTE
101: KYYHLANSKN TLSLNLGKQI LIENYSLGKS LTQKQIVQLA SKGEQQDAIN VVLTASDVAV DGFCVNRCGT HGASKGAVIN GKTYKFAYIW VGNSETFCPG
201: YCAWPFHQPI YGPQSSPLGA PNNDVGVDGM VINLASLLAG TATNPFGNGY YQGEADAPLE AASACPGVYA KGAYPGYAGD LLVDKTTGAS YNAHGTNGRK
301: YLVPALYDPA TSSCSTLV
Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.