Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G316700.1 | Wheat | endoplasmic reticulum | 96.23 | 95.33 |
| TraesCS6D01G296200.1 | Wheat | endoplasmic reticulum | 95.91 | 94.43 |
| Os02t0756800-01 | Rice | extracellular | 82.39 | 79.88 |
| Zm00001d052206_P001 | Maize | plastid | 77.04 | 75.38 |
| EES05496 | Sorghum | golgi, vacuole | 77.99 | 75.15 |
| HORVU6Hr1G077770.1 | Barley | mitochondrion, plastid | 94.65 | 72.53 |
| Solyc04g074420.1.1 | Tomato | nucleus | 19.81 | 70.79 |
| TraesCS7B01G084300.1 | Wheat | extracellular, golgi | 70.75 | 69.66 |
| TraesCS7B01G084100.1 | Wheat | extracellular | 69.18 | 68.11 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 53.77 | 65.77 |
| TraesCS6B01G347400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 63.84 | 65.48 |
| TraesCS6B01G347300.1 | Wheat | endoplasmic reticulum, extracellular | 64.47 | 65.08 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 42.14 | 64.42 |
| KRH16765 | Soybean | nucleus | 56.92 | 57.83 |
| TraesCS6B01G347100.1 | Wheat | endoplasmic reticulum, extracellular | 54.09 | 55.66 |
| VIT_18s0001g06170.t01 | Wine grape | endoplasmic reticulum, vacuole | 55.66 | 55.66 |
| VIT_18s0001g06020.t01 | Wine grape | endoplasmic reticulum, vacuole | 55.35 | 55.35 |
| KRH53041 | Soybean | nucleus | 55.97 | 54.94 |
| KRH16766 | Soybean | nucleus | 54.09 | 54.78 |
| KRH72378 | Soybean | nucleus | 53.46 | 54.31 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 54.4 | 54.23 |
| KRH53040 | Soybean | nucleus | 52.52 | 54.22 |
| PGSC0003DMT400079159 | Potato | vacuole | 54.09 | 53.42 |
| Solyc04g074450.1.1 | Tomato | extracellular | 52.52 | 53.18 |
| PGSC0003DMT400079209 | Potato | extracellular | 52.2 | 53.04 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 52.2 | 52.87 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 51.57 | 52.73 |
| Solyc04g074410.1.1 | Tomato | nucleus | 51.57 | 52.56 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 51.57 | 52.56 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 52.52 | 52.52 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 51.26 | 52.41 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 51.57 | 52.23 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 51.89 | 51.89 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 50.94 | 51.59 |
| Solyc04g074440.1.1 | Tomato | nucleus | 50.94 | 51.43 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 51.26 | 51.26 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 50.94 | 50.94 |
| AT1G35140.1 | Thale cress | extracellular | 49.06 | 50.49 |
| KRH62324 | Soybean | nucleus | 56.92 | 47.88 |
| TraesCS5B01G052300.1 | Wheat | vacuole | 47.8 | 47.2 |
| KRH62323 | Soybean | plastid | 52.52 | 46.91 |
| Solyc04g074430.1.1 | Tomato | nucleus | 16.67 | 40.15 |
| TraesCS2B01G237800.1 | Wheat | extracellular, plasma membrane | 37.42 | 35.95 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G347200.1 | EnsemblPlantsGene:TraesCS6B01G347200 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF34 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:611500056..611501012
Molecular Weight (calculated)
32891.3 Da
IEP (calculated)
8.454
GRAVY (calculated)
0.128
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGFSYTSHV AVALVSVLLL SLAHGSLGLG ARRLMELYKP DPSELLTYHN GAVLQGAIPV SVLWYGRFTP AQKAVVSDFL LSLTTASPAP TPSVSQWWNT
101: IHQLYLSKAK GANAKRATQV ALAGQVSDER CSLGKSLKLP QLAALAASAK PRKGGIALVL TAEDVAVEGF CRSRCGLHGS DAAARTAYVW VGNSASQCPG
201: QCAWPFHKPV YGPQAPALVP PSGDVGMDGM VMNVASMVAG AVTNPFGDGF YQGPREAPLE AATACPGVYG SGAYPGYAGN LAVDATTGAS YNANGANGRK
301: YLLPALFDPD TSTCSTLV
101: IHQLYLSKAK GANAKRATQV ALAGQVSDER CSLGKSLKLP QLAALAASAK PRKGGIALVL TAEDVAVEGF CRSRCGLHGS DAAARTAYVW VGNSASQCPG
201: QCAWPFHKPV YGPQAPALVP PSGDVGMDGM VMNVASMVAG AVTNPFGDGF YQGPREAPLE AATACPGVYG SGAYPGYAGN LAVDATTGAS YNANGANGRK
301: YLLPALFDPD TSTCSTLV
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.