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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 2
  • plasma membrane 2
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:plastid
 nucleus: 21132161
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH53041 Soybean nucleus 76.45 89.2
Solyc04g074420.1.1 Tomato nucleus 19.58 83.15
VIT_18s0001g06150.t01 Wine grape vacuole 67.46 79.94
KRH16765 Soybean nucleus 64.29 77.64
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 60.85 73.72
Solyc04g074410.1.1 Tomato nucleus 60.58 73.4
Solyc04g074450.1.1 Tomato extracellular 60.58 72.93
PGSC0003DMT400079209 Potato extracellular 60.32 72.84
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 60.85 72.33
PGSC0003DMT400079208 Potato endoplasmic reticulum, vacuole 60.85 72.33
KRH16766 Soybean nucleus 59.79 71.97
KRH53040 Soybean nucleus 58.47 71.75
AT4G08950.1 Thale cress extracellular, vacuole 59.52 71.66
Solyc04g074440.1.1 Tomato nucleus 59.52 71.43
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 58.73 71.38
CDX90701 Canola endoplasmic reticulum, vacuole 58.73 71.38
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 59.26 71.34
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 59.79 71.07
KRH72378 Soybean nucleus 58.73 70.93
CDY05033 Canola endoplasmic reticulum, vacuole 58.73 70.7
GSMUA_Achr10P... Banana cytosol, extracellular, plastid 37.04 64.52
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 38.62 63.2
KRH18203 Soybean nucleus 50.53 63.04
KRH62323 Soybean plastid 59.26 62.92
Solyc04g074430.1.1 Tomato nucleus 21.69 62.12
KRH42138 Soybean nucleus 49.74 61.84
GSMUA_Achr7P12690_001 Banana extracellular 33.86 61.54
Os02t0757100-01 Rice extracellular 50.26 61.09
TraesCS6A01G316600.1 Wheat endoplasmic reticulum, extracellular 49.74 60.45
EES07217 Sorghum endoplasmic reticulum, extracellular 49.74 60.45
KRH43888 Soybean extracellular 46.56 59.66
TraesCS6B01G347100.1 Wheat endoplasmic reticulum, extracellular 48.68 59.55
TraesCS6D01G296100.1 Wheat endoplasmic reticulum, extracellular 48.68 59.16
GSMUA_Achr7P12680_001 Banana endoplasmic reticulum, extracellular 40.21 59.14
HORVU6Hr1G077750.1 Barley endoplasmic reticulum, extracellular 48.94 58.73
KRH10561 Soybean extracellular 45.77 58.25
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 39.95 58.08
Zm00001d052205_P001 Maize extracellular 47.88 57.46
Zm00001d018107_P001 Maize endoplasmic reticulum, extracellular 47.62 57.32
KRH72379 Soybean extracellular, vacuole 47.88 57.28
KRH16767 Soybean extracellular, vacuole 47.88 57.28
TraesCS6B01G347200.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.88 56.92
TraesCS6A01G316700.1 Wheat endoplasmic reticulum 48.15 56.7
TraesCS6D01G296200.1 Wheat endoplasmic reticulum 48.15 56.35
Os06t0220000-01 Rice extracellular 42.06 56.18
Os02t0756200-02 Rice extracellular 45.77 56.17
HORVU6Hr1G077780.1 Barley endoplasmic reticulum, extracellular 46.56 55.87
TraesCSU01G264500.1 Wheat plastid 42.86 55.86
TraesCS6B01G347300.1 Wheat endoplasmic reticulum, extracellular 46.3 55.56
TraesCS6A01G316800.1 Wheat endoplasmic reticulum, extracellular, vacuole 46.03 55.24
HORVU6Hr1G077790.1 Barley endoplasmic reticulum, extracellular 45.24 55.16
TraesCS6D01G296300.1 Wheat extracellular, plasma membrane 45.77 54.92
TraesCS6A01G316900.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.97 54.84
TraesCS6D01G296400.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.97 54.66
KRH62322 Soybean nucleus 45.24 54.29
TraesCS7D01G180600.1 Wheat extracellular 45.77 53.89
TraesCS6B01G347400.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.18 53.87
Os02t0756600-01 Rice extracellular 44.44 53.67
EES05496 Sorghum golgi, vacuole 46.83 53.64
TraesCS7A01G178400.1 Wheat extracellular 45.24 53.44
Os02t0756800-01 Rice extracellular 46.3 53.35
TraesCS7B01G084300.1 Wheat extracellular, golgi 45.5 53.25
TraesCS7D01G180300.1 Wheat extracellular 44.97 53.12
KRH53039 Soybean extracellular 44.71 52.98
TraesCS7B01G084100.1 Wheat extracellular 45.24 52.94
TraesCS7A01G178500.1 Wheat extracellular 45.24 52.94
TraesCS7D01G180400.1 Wheat extracellular 44.71 52.81
Zm00001d052206_P001 Maize plastid 44.97 52.31
EES05498 Sorghum endoplasmic reticulum, vacuole 42.86 52.26
Zm00001d018105_P001 Maize extracellular 42.86 51.43
Zm00001d044864_P001 Maize mitochondrion 44.44 51.22
EER88094 Sorghum endoplasmic reticulum, vacuole 45.77 51.18
TraesCS7D01G180500.1 Wheat extracellular 42.33 51.12
Zm00001d037205_P001 Maize extracellular 44.97 50.6
KXG30713 Sorghum golgi, vacuole 42.59 50.31
Os06t0220200-00 Rice endoplasmic reticulum, extracellular, vacuole 40.48 47.66
EER89439 Sorghum extracellular 43.39 46.46
Os06t0220300-00 Rice extracellular 38.36 45.89
HORVU6Hr1G077770.1 Barley mitochondrion, plastid 48.15 43.86
GSMUA_Achr7P12670_001 Banana endoplasmic reticulum, extracellular 12.7 42.86
KRH65072 Soybean cytosol 11.9 36.89
KRH51406 Soybean plasma membrane, vacuole 27.78 34.88
GSMUA_Achr6P30430_001 Banana endoplasmic reticulum 24.07 34.87
KRH60707 Soybean plasma membrane, vacuole 26.45 33.9
KRH40006 Soybean nucleus 29.37 31.9
KRG92438 Soybean nucleus 28.84 31.87
KRH23788 Soybean nucleus 28.57 31.03
KRH34361 Soybean nucleus 29.63 29.17
Zm00001d018106_P001 Maize plastid 43.39 27.52
HORVU7Hr1G036780.8 Barley golgi 24.07 25.85
HORVU6Hr1G077820.1 Barley endoplasmic reticulum 11.38 21.83
Protein Annotations
EMBL:ACUP02002235EnsemblPlants:KRH62324EnsemblPlantsGene:GLYMA_04G100400InterPro:EXORDIUM-likePANTHER:PTHR31279PANTHER:PTHR31279:SF3
PFAM:PF04674ProteinID:KRH62324ProteinID:KRH62324.1SEG:segUniParc:UPI0002964822UniProt:K7KJ93
MapMan:35.1:::::
Description
hypothetical protein
Coordinates
chr4:-:9219564..9221412
Molecular Weight (calculated)
40617.6 Da
IEP (calculated)
9.427
GRAVY (calculated)
-0.076
Length
378 amino acids
Sequence
(BLAST)
001: MPEGLTTPHA QKSLFNLSPQ LKTHISLDLY IPLFLSPSST SQHPPIPRFK KRAVIVVTIQ KMAGLVVSSQ CFLKLLLVVS VFHVSFAARR LNELVQDQSQ
101: LLHYHNGPLL YGKIAVNLIW YGNFKPSQKA IITDFVTSLS SPASQSSQPS VATWWKTTEK YYHLSPRKAS LSLSLGDQIL DETYSLGKSL TGKNLVQLAS
201: KGGQRNSINV VLTSADVAVE GFCMSRCGTH GSSASHLKKN SKSYKFAYIW VGNSETQCPG QCAWPFHQPI YGPQSPPLVA PNNDVGLDGM VINLASLLAG
301: TATNPFGNGY FQGPAEAPLE AASACPGVYG KGAYPGYAGD LLVDSTTGAS YNVKGANGRK YLVPALYDPS TSSCSTPV
Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.