Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P12670_001 | Banana | endoplasmic reticulum, extracellular | 38.64 | 45.54 |
| Solyc04g074410.1.1 | Tomato | nucleus | 81.82 | 34.62 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 81.06 | 34.41 |
| Solyc04g074440.1.1 | Tomato | nucleus | 81.06 | 33.97 |
| Solyc04g074450.1.1 | Tomato | extracellular | 79.55 | 33.44 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 68.94 | 28.53 |
| KRH16765 | Soybean | nucleus | 63.64 | 26.84 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 62.12 | 26.11 |
| KRH53041 | Soybean | nucleus | 62.12 | 25.31 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 59.85 | 25.16 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 43.94 | 25.11 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 59.09 | 25.08 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 59.09 | 24.84 |
| Os02t0757100-01 | Rice | extracellular | 55.3 | 23.47 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 35.61 | 22.6 |
| Solyc01g105410.2.1 | Tomato | endoplasmic reticulum | 51.52 | 22.59 |
| GSMUA_Achr7P12680_001 | Banana | endoplasmic reticulum, extracellular | 43.18 | 22.18 |
| KRH62324 | Soybean | nucleus | 62.12 | 21.69 |
| HORVU6Hr1G077750.1 | Barley | endoplasmic reticulum, extracellular | 50.76 | 21.27 |
| TraesCS6A01G316600.1 | Wheat | endoplasmic reticulum, extracellular | 50.0 | 21.22 |
| EES07217 | Sorghum | endoplasmic reticulum, extracellular | 50.0 | 21.22 |
| Solyc04g074470.1.1 | Tomato | nucleus | 49.24 | 21.04 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 34.09 | 20.74 |
| TraesCS6B01G347100.1 | Wheat | endoplasmic reticulum, extracellular | 48.48 | 20.71 |
| TraesCS6D01G296100.1 | Wheat | endoplasmic reticulum, extracellular | 48.48 | 20.58 |
| HORVU6Hr1G077820.1 | Barley | endoplasmic reticulum | 30.3 | 20.3 |
| Zm00001d018107_P001 | Maize | endoplasmic reticulum, extracellular | 47.73 | 20.06 |
| Zm00001d052205_P001 | Maize | extracellular | 46.97 | 19.68 |
| TraesCS6B01G347400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.21 | 19.68 |
| TraesCS6D01G296400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.21 | 19.61 |
| Os02t0756200-02 | Rice | extracellular | 45.45 | 19.48 |
| HORVU6Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular | 44.7 | 19.03 |
| TraesCS6A01G316900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.7 | 19.03 |
| GSMUA_Achr6P30430_001 | Banana | endoplasmic reticulum | 37.12 | 18.77 |
| EES05498 | Sorghum | endoplasmic reticulum, vacuole | 43.94 | 18.71 |
| Os06t0220200-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 44.7 | 18.38 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 34.85 | 17.69 |
| TraesCS7D01G180600.1 | Wheat | extracellular | 42.42 | 17.45 |
| TraesCSU01G264500.1 | Wheat | plastid | 37.88 | 17.24 |
| TraesCS6D01G296300.1 | Wheat | extracellular, plasma membrane | 40.91 | 17.14 |
| TraesCS7B01G084300.1 | Wheat | extracellular, golgi | 41.67 | 17.03 |
| TraesCS7D01G180300.1 | Wheat | extracellular | 40.91 | 16.88 |
| TraesCS7A01G178400.1 | Wheat | extracellular | 40.91 | 16.88 |
| TraesCS7D01G180400.1 | Wheat | extracellular | 40.91 | 16.88 |
| EER88094 | Sorghum | endoplasmic reticulum, vacuole | 43.18 | 16.86 |
| HORVU6Hr1G077780.1 | Barley | endoplasmic reticulum, extracellular | 40.15 | 16.83 |
| TraesCS6A01G316800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 40.15 | 16.83 |
| Os06t0220300-00 | Rice | extracellular | 40.15 | 16.77 |
| Zm00001d044864_P001 | Maize | mitochondrion | 41.67 | 16.77 |
| TraesCS7B01G084100.1 | Wheat | extracellular | 40.91 | 16.72 |
| TraesCS7A01G178500.1 | Wheat | extracellular | 40.91 | 16.72 |
| TraesCS6B01G347200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 40.15 | 16.67 |
| Zm00001d037205_P001 | Maize | extracellular | 42.42 | 16.67 |
| Os02t0756600-01 | Rice | extracellular | 39.39 | 16.61 |
| TraesCS6A01G316700.1 | Wheat | endoplasmic reticulum | 40.15 | 16.51 |
| TraesCS6B01G347300.1 | Wheat | endoplasmic reticulum, extracellular | 39.39 | 16.51 |
| TraesCS7D01G180500.1 | Wheat | extracellular | 38.64 | 16.29 |
| EER89439 | Sorghum | extracellular | 43.18 | 16.15 |
| TraesCS6D01G296200.1 | Wheat | endoplasmic reticulum | 39.39 | 16.1 |
| EES05496 | Sorghum | golgi, vacuole | 40.15 | 16.06 |
| Zm00001d052206_P001 | Maize | plastid | 39.39 | 16.0 |
| Os06t0220000-01 | Rice | extracellular | 34.09 | 15.9 |
| Solyc04g074400.1.1 | Tomato | nucleus | 37.12 | 15.86 |
| Os02t0756800-01 | Rice | extracellular | 37.88 | 15.24 |
| Zm00001d018105_P001 | Maize | extracellular | 35.61 | 14.92 |
| KXG30713 | Sorghum | golgi, vacuole | 35.61 | 14.69 |
| Solyc03g083560.1.1 | Tomato | nucleus | 34.85 | 13.18 |
| Solyc10g074540.1.1 | Tomato | nucleus | 33.33 | 12.79 |
| Solyc06g034390.1.1 | Tomato | nucleus | 33.33 | 12.72 |
| HORVU6Hr1G077770.1 | Barley | mitochondrion, plastid | 39.39 | 12.53 |
| HORVU7Hr1G036780.8 | Barley | golgi | 28.79 | 10.8 |
| Zm00001d018106_P001 | Maize | plastid | 34.85 | 7.72 |
| Solyc04g074420.1.1 | Tomato | nucleus | 3.79 | 5.62 |
| Solyc04g074460.1.1 | Tomato | cytosol, plastid | 0.76 | 1.09 |
Protein Annotations
| EnsemblPlants:Solyc04g074430.1.1 | EnsemblPlantsGene:Solyc04g074430.1 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF3 | PFAM:PF04674 |
| SEG:seg | UniParc:UPI000276563C | UniProt:K4BTY1 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4:-:60432054..60432452
Molecular Weight (calculated)
14890.9 Da
IEP (calculated)
10.158
GRAVY (calculated)
-0.322
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MWCFASRKLT ALVEQTQLLH YHKGALLSGK ISVNLIWYGK FKPSQRAILS DFINSLSSSN PSKTNPSVAQ WWKTTEKYYH LANSNNTLSL NLGKQVLVEN
101: YSLGKSLTQK QIVQLASKGE QKDAINCCID RL
101: YSLGKSLTQK QIVQLASKGE QKDAINCCID RL
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.