Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G316800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 96.51 | 96.51 |
| TraesCS6B01G347300.1 | Wheat | endoplasmic reticulum, extracellular | 94.6 | 94.6 |
| TraesCS6D01G296300.1 | Wheat | extracellular, plasma membrane | 93.97 | 93.97 |
| Os02t0756600-01 | Rice | extracellular | 74.29 | 74.76 |
| Solyc04g074420.1.1 | Tomato | nucleus | 20.63 | 73.03 |
| KXG30713 | Sorghum | golgi, vacuole | 71.11 | 70.0 |
| Zm00001d018105_P001 | Maize | extracellular | 67.62 | 67.62 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 41.59 | 62.98 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 51.11 | 61.92 |
| HORVU6Hr1G077790.1 | Barley | endoplasmic reticulum, extracellular | 60.0 | 60.97 |
| KRH53041 | Soybean | nucleus | 55.87 | 54.32 |
| Solyc04g074450.1.1 | Tomato | extracellular | 53.02 | 53.18 |
| KRH16765 | Soybean | nucleus | 52.7 | 53.04 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 52.38 | 52.88 |
| Solyc04g074410.1.1 | Tomato | nucleus | 52.38 | 52.88 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 52.06 | 52.73 |
| PGSC0003DMT400079209 | Potato | extracellular | 52.38 | 52.72 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 52.06 | 52.23 |
| VIT_18s0001g06170.t01 | Wine grape | endoplasmic reticulum, vacuole | 52.7 | 52.2 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 52.7 | 52.04 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 52.38 | 51.89 |
| VIT_18s0001g06020.t01 | Wine grape | endoplasmic reticulum, vacuole | 52.38 | 51.89 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 51.11 | 51.77 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 52.06 | 51.57 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 52.06 | 51.57 |
| Solyc04g074440.1.1 | Tomato | nucleus | 51.43 | 51.43 |
| HORVU6Hr1G077750.1 | Barley | endoplasmic reticulum, extracellular | 51.43 | 51.43 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 51.11 | 51.27 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 51.11 | 51.27 |
| KRH53040 | Soybean | nucleus | 49.21 | 50.32 |
| KRH16766 | Soybean | nucleus | 49.84 | 50.0 |
| PGSC0003DMT400079159 | Potato | vacuole | 50.79 | 49.69 |
| AT1G35140.1 | Thale cress | extracellular | 48.57 | 49.51 |
| KRH72378 | Soybean | nucleus | 48.89 | 49.2 |
| HORVU6Hr1G077770.1 | Barley | mitochondrion, plastid | 64.44 | 48.92 |
| HORVU7Hr1G036710.2 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 49.21 | 48.74 |
| KRH62324 | Soybean | nucleus | 55.87 | 46.56 |
| HORVU5Hr1G011440.2 | Barley | endoplasmic reticulum, plasma membrane | 46.35 | 46.35 |
| KRH62323 | Soybean | plastid | 47.94 | 42.42 |
| Solyc04g074430.1.1 | Tomato | nucleus | 16.83 | 40.15 |
| HORVU3Hr1G007150.2 | Barley | extracellular | 17.78 | 35.9 |
| Zm00001d018106_P001 | Maize | plastid | 66.98 | 35.4 |
| HORVU4Hr1G033560.1 | Barley | cytosol, extracellular | 8.25 | 34.21 |
| HORVU7Hr1G036780.8 | Barley | golgi | 33.33 | 29.83 |
| HORVU6Hr1G077820.1 | Barley | endoplasmic reticulum | 18.41 | 29.44 |
| HORVU2Hr1G049410.1 | Barley | extracellular, peroxisome | 33.97 | 28.31 |
| HORVU7Hr1G014410.3 | Barley | plastid | 33.97 | 24.04 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G077780.1 | EnsemblPlantsGene:HORVU6Hr1G077780 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF11 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000294A1E1 | UniProt:M0WIS0 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr6H:+:532186338..532187662
Molecular Weight (calculated)
32436.4 Da
IEP (calculated)
5.217
GRAVY (calculated)
0.083
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVCAKAVL LAAVMLATAA QVCMGARRRM ELYRPDPADM LSYHNGAVLH GDIAVSVLWY GNFKPAQKAV ILDFLLSLTA EPQAASPSVA QWWGTIDQQY
101: LSPASAKSSG AGESTRVLLA DQLSDGACSM GKSLTLEQIT ALAATAKPKK GGVAVVFTAQ DVAVEGFGMG RCSLHGSDSS SGTTHIWVGN PETQCPGACA
201: WPFHQPTYGP QDAPLVAPNG DVGADAMVMN LASMLAGAAT NPFGDGYYQG SSDAPLEAAT ACPGVFGNGA YPGYAGDLKV DQATGASYNC NGAHGRKYLL
301: PALYDPSTSA CGTLV
101: LSPASAKSSG AGESTRVLLA DQLSDGACSM GKSLTLEQIT ALAATAKPKK GGVAVVFTAQ DVAVEGFGMG RCSLHGSDSS SGTTHIWVGN PETQCPGACA
201: WPFHQPTYGP QDAPLVAPNG DVGADAMVMN LASMLAGAAT NPFGDGYYQG SSDAPLEAAT ACPGVFGNGA YPGYAGDLKV DQATGASYNC NGAHGRKYLL
301: PALYDPSTSA CGTLV
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.