Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G316800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 96.83 | 96.83 |
| TraesCS6D01G296300.1 | Wheat | extracellular, plasma membrane | 95.56 | 95.56 |
| HORVU6Hr1G077780.1 | Barley | endoplasmic reticulum, extracellular | 94.6 | 94.6 |
| Os02t0756600-01 | Rice | extracellular | 73.97 | 74.44 |
| Solyc04g074420.1.1 | Tomato | nucleus | 20.0 | 70.79 |
| KXG30713 | Sorghum | golgi, vacuole | 71.11 | 70.0 |
| Zm00001d018105_P001 | Maize | extracellular | 66.67 | 66.67 |
| TraesCS6B01G347200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 65.08 | 64.47 |
| GSMUA_Achr7P12690_001 | Banana | extracellular | 40.95 | 62.02 |
| TraesCS6B01G347400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 60.63 | 61.61 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 50.79 | 61.54 |
| TraesCS7B01G084100.1 | Wheat | extracellular | 62.54 | 60.99 |
| TraesCS7B01G084300.1 | Wheat | extracellular, golgi | 62.54 | 60.99 |
| KRH53041 | Soybean | nucleus | 56.19 | 54.63 |
| KRH16765 | Soybean | nucleus | 52.38 | 52.72 |
| Solyc04g074450.1.1 | Tomato | extracellular | 51.75 | 51.91 |
| Solyc04g074410.1.1 | Tomato | nucleus | 51.11 | 51.6 |
| PGSC0003DMT400079157 | Potato | endoplasmic reticulum, vacuole | 51.11 | 51.6 |
| AT4G08950.1 | Thale cress | extracellular, vacuole | 51.43 | 51.59 |
| PGSC0003DMT400079158 | Potato | endoplasmic reticulum, vacuole | 50.79 | 51.45 |
| CDX90701 | Canola | endoplasmic reticulum, vacuole | 50.79 | 51.45 |
| PGSC0003DMT400079209 | Potato | extracellular | 51.11 | 51.44 |
| VIT_18s0001g06170.t01 | Wine grape | endoplasmic reticulum, vacuole | 51.75 | 51.26 |
| VIT_18s0001g06150.t01 | Wine grape | vacuole | 51.75 | 51.1 |
| Bra000660.1-P | Field mustard | endoplasmic reticulum, vacuole | 50.79 | 50.96 |
| CDY05033 | Canola | endoplasmic reticulum, vacuole | 50.79 | 50.96 |
| VIT_18s0001g06020.t01 | Wine grape | endoplasmic reticulum, vacuole | 51.43 | 50.94 |
| TraesCS6B01G347100.1 | Wheat | endoplasmic reticulum, extracellular | 49.84 | 50.81 |
| PGSC0003DMT400079206 | Potato | endoplasmic reticulum, extracellular | 51.11 | 50.63 |
| KRH53040 | Soybean | nucleus | 49.21 | 50.32 |
| KRH16766 | Soybean | nucleus | 50.16 | 50.32 |
| PGSC0003DMT400079208 | Potato | endoplasmic reticulum, vacuole | 50.79 | 50.31 |
| PGSC0003DMT400079207 | Potato | endoplasmic reticulum, vacuole | 50.79 | 50.31 |
| Solyc04g074440.1.1 | Tomato | nucleus | 50.16 | 50.16 |
| TraesCS7B01G083900.1 | Wheat | endoplasmic reticulum, vacuole | 49.84 | 49.37 |
| KRH72378 | Soybean | nucleus | 48.89 | 49.2 |
| PGSC0003DMT400079159 | Potato | vacuole | 50.16 | 49.07 |
| AT1G35140.1 | Thale cress | extracellular | 47.62 | 48.54 |
| KRH62324 | Soybean | nucleus | 55.56 | 46.3 |
| TraesCS5B01G052300.1 | Wheat | vacuole | 46.67 | 45.65 |
| KRH62323 | Soybean | plastid | 47.94 | 42.42 |
| Solyc04g074430.1.1 | Tomato | nucleus | 16.51 | 39.39 |
| Zm00001d018106_P001 | Maize | plastid | 66.03 | 34.9 |
| TraesCS2B01G237800.1 | Wheat | extracellular, plasma membrane | 33.02 | 31.42 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G347300.1 | EnsemblPlantsGene:TraesCS6B01G347300 | InterPro:EXORDIUM-like | PANTHER:PTHR31279 | PANTHER:PTHR31279:SF11 | PFAM:PF04674 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:611504331..611505278
Molecular Weight (calculated)
32448.4 Da
IEP (calculated)
5.552
GRAVY (calculated)
0.082
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVVCAKAVL LAAVMLASVA QLCMGARRRM ELYRPDPADM LSYHNGAVLH GDIAVSVLWY GNFKPAQKAV IVDFLLSLTA ETQAASPSVA QWWSTIDQQY
101: LSPASAKSNG AGAKTRVLLA DQLSDGECST GKSLTLEQIT ALAATASPKK GGVAVVFTAQ DVAVEGFGMG RCSLHGSDAS SGTTHIWVGN PETQCPGACA
201: WPFHQPAYGP QDAPLVAPNG DVGADAMVMN FASMLAGAAT NPFGDGYYQG SSDAPLEAAT ACPGVFGNGA YPGYAGDLKV DQATGASYNC NGAHGRKYLL
301: PALYDPSKSA CGTLV
101: LSPASAKSNG AGAKTRVLLA DQLSDGECST GKSLTLEQIT ALAATASPKK GGVAVVFTAQ DVAVEGFGMG RCSLHGSDAS SGTTHIWVGN PETQCPGACA
201: WPFHQPAYGP QDAPLVAPNG DVGADAMVMN FASMLAGAAT NPFGDGYYQG SSDAPLEAAT ACPGVFGNGA YPGYAGDLKV DQATGASYNC NGAHGRKYLL
301: PALYDPSKSA CGTLV
001: MASFVMGYFL LFAVAFMCLD ARTDKTQDYT SFQYHKGALL TGDVSINLIW YGKFKPSQRA IVTDFVASLS SSRRSTMAQN PSVATWWKTV EKYYQFRKMT
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
101: TTRGLSLSLG EQILDQGYSM GKSLTEKNLK DLAAKGGQSY AVNVVLTSAD VTVQGFCMNR CGSHGTGSGS GKKGSRFAYI WVGNSETQCP GQCAWPFHAP
201: VYGPQSPPLV APNNDVGLDG MVINLASLMA ATATNPFGDG YYQGPKTAPL EAGSACTGVY GKGSYPGYAG ELLVDATTGG SYNVKGLNGR KYLLPALFDP
301: KTDSCSTLF
Arabidopsis Description
EXL1Protein EXORDIUM-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6E4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.