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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018105_P001 Maize extracellular 81.88 83.17
TraesCS6A01G316800.1 Wheat endoplasmic reticulum, extracellular, vacuole 70.94 72.06
TraesCS6D01G296300.1 Wheat extracellular, plasma membrane 70.31 71.43
TraesCS6B01G347300.1 Wheat endoplasmic reticulum, extracellular 70.0 71.11
HORVU6Hr1G077780.1 Barley endoplasmic reticulum, extracellular 70.0 71.11
Os02t0756600-01 Rice extracellular 68.75 70.29
EES05498 Sorghum endoplasmic reticulum, vacuole 62.5 64.52
Solyc04g074420.1.1 Tomato nucleus 17.81 64.04
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 51.25 63.08
EES05496 Sorghum golgi, vacuole 65.0 63.03
EER88094 Sorghum endoplasmic reticulum, vacuole 61.88 58.58
GSMUA_Achr7P12690_001 Banana extracellular 37.81 58.17
EES07217 Sorghum endoplasmic reticulum, extracellular 50.62 52.09
EER89439 Sorghum extracellular 57.19 51.84
KRH53041 Soybean nucleus 51.56 50.93
KRH16765 Soybean nucleus 49.38 50.48
VIT_18s0001g06170.t01 Wine grape endoplasmic reticulum, vacuole 49.38 49.69
VIT_18s0001g06020.t01 Wine grape endoplasmic reticulum, vacuole 49.06 49.37
KRH53040 Soybean nucleus 47.5 49.35
VIT_18s0001g06150.t01 Wine grape vacuole 49.06 49.22
AT4G08950.1 Thale cress extracellular, vacuole 48.12 49.04
KRH16766 Soybean nucleus 48.12 49.04
Solyc04g074450.1.1 Tomato extracellular 47.81 48.73
PGSC0003DMT400079157 Potato endoplasmic reticulum, vacuole 47.5 48.72
PGSC0003DMT400079209 Potato extracellular 47.5 48.56
Solyc04g074410.1.1 Tomato nucleus 47.19 48.4
KRH72378 Soybean nucleus 47.19 48.24
CDX90701 Canola endoplasmic reticulum, vacuole 46.56 47.91
PGSC0003DMT400079159 Potato vacuole 48.12 47.83
PGSC0003DMT400079206 Potato endoplasmic reticulum, extracellular 47.5 47.8
PGSC0003DMT400079158 Potato endoplasmic reticulum, vacuole 46.25 47.59
AT1G35140.1 Thale cress extracellular 45.94 47.57
PGSC0003DMT400079207 Potato endoplasmic reticulum, vacuole 47.19 47.48
Bra000660.1-P Field mustard endoplasmic reticulum, vacuole 46.56 47.45
Solyc04g074440.1.1 Tomato nucleus 46.56 47.3
PGSC0003DMT400079208 Potato endoplasmic reticulum, vacuole 46.88 47.17
CDY05033 Canola endoplasmic reticulum, vacuole 46.25 47.13
KXG19617 Sorghum golgi, mitochondrion, vacuole 47.5 46.34
Zm00001d018106_P001 Maize plastid 82.19 44.13
OQU81032 Sorghum extracellular 42.5 43.04
KRH62323 Soybean plastid 47.5 42.7
KRH62324 Soybean nucleus 50.31 42.59
OQU91894 Sorghum cytosol, endoplasmic reticulum, plasma membrane 44.38 37.87
Solyc04g074430.1.1 Tomato nucleus 14.69 35.61
EER87789 Sorghum golgi, vacuole 34.69 32.55
EER94575 Sorghum endoplasmic reticulum, plasma membrane 33.44 32.42
EER99411 Sorghum vacuole 33.12 30.99
Protein Annotations
EnsemblPlants:KXG30713EnsemblPlantsGene:SORBI_3004G229400InterPro:EXORDIUM-likePANTHER:PTHR31279PANTHER:PTHR31279:SF11PFAM:PF04674
ProteinID:KXG30713ProteinID:KXG30713.1SEG:segSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0003C705F5
UniProt:A0A194YR54MapMan:35.1::::
Description
hypothetical protein
Coordinates
chr4:+:57929578..57930924
Molecular Weight (calculated)
33672.0 Da
IEP (calculated)
6.490
GRAVY (calculated)
0.043
Length
320 amino acids
Sequence
(BLAST)
001: MAATRPKALV LAVVVLLVSS AQLSMGARRR MELYQPNPAD MLSYHNGAVL HADIFVSVLW YGSFTQVQKT IIYDFLLSLT MMPQAASPSV SQWWNIIDQQ
101: YLSKAAQASP ANAGGATTKT RVMLDNQVSD DGCSMGTSLT LAQISALAAR AKPKKGGVAL VFTAQDVTVE GFCMSQCGLH GSDAESGTTY VWVGNSATQC
201: PGQCAWPFHQ PLYGPQSPPL VPPNGDAAVD GMIINLASQF AGVVTNPFRD AYYQGSSDAP LEAATACLGQ FGSGSYPGYA GDLKIDQASG ASYNANGAQG
301: RKYLLPALYN PSTSACSTLV
Best Arabidopsis Sequence Match ( AT4G08950.1 )
(BLAST)
001: MYLLVFKLFL FLSLLQISVS ARNLASQEPN QFQLLKYHKG ALLSGKISVN LIWYGKFKPS QRAIISDFIT SLTHTSPTSK TLHQPSVATW WKTTEKYYKL
101: ATPSKNSSPL SLTLGKQIID ESCSLGKSLT DKKIQTLASK GDQRNAINVV LTSADVTVTG FGMSRCGTHG HARGLGKRGS KFAYIWVGNS ETQCPGQCAW
201: PFHAPVYGPQ SPPLVAPNND VGLDGMVINL ASLLAGTATN PFGNGYYQGP QNAPLEAASA CPGVYGKGAY PGYAGDLLVD TTTGGSFNAY GANGRKFLLP
301: ALYDPTTSAC STMV
Arabidopsis Description
EXOProtein EXORDIUM [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPE7]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.